PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA06160.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

ARF

Protein Properties

Length: 381aa MW: 42681.7 Da PI: 8.2655

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA06160.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	77.9	1e-24	118	219	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f k+lt+sd+++ g +++p+ +ae++ g++ ++ ++++d +g We+++iyr++++r++lt+GW++Fv+ ++L +gD+vvF+ +++ +el OVA06160.1 118 FAKILTTSDANNGGGFSVPRFCAESIfpplnykAGVPVQN--ISVRDVHGVFWEFRHIYRGTPRRHLLTTGWSKFVNHKKLVAGDSVVFM--KNQIGEL 212 89*******************9999998888885..9********************************************..679999 PP EEEEE-S CS B3 93 vvkvfrk 99 v+++rk OVA06160.1 213 SVGIRRK 219 *****97 PP
2	Auxin_resp	84.6	2.1e-28	268	349	3	83
Auxin_resp 3 haastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 + a + Fevv++Pra+++e+vvk+ekve++l++ +++Gm +km++etedss++++ +G++++ +d W++S+Wr+L+ OVA06160.1 268 ELAGGNREFEVVWYPRAGSAEYVVKAEKVEESLNMYWTAGMSIKMQVETEDSSRITWlQGIISSAAFTDHGPWRGSPWRMLQ 349 55666789************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MNSSMVYDLD PSVWKACAGS SVEIPVVDSR VYYFPQGHAE QASTTPDFSV VKYTKSFFLC 60 RIVSVQFLAN QDTDEVFVKI RLQPIDGSSG LVWSQGMRGS QGMRGEDVDN KETKISSFAK 120 ILTTSDANNG GGFSVPRFCA ESIFPPLNYK AGVPVQNISV RDVHGVFWEF RHIYRGTPRR 180 HLLTTGWSKF VNHKKLVAGD SVVFMKNQIG ELSVGIRRKV RLTESVDFGR WNCQNVRVVE 240 EECRGGELGF SRSVRGRVSA ESVLEAVELA GGNREFEVVW YPRAGSAEYV VKAEKVEESL 300 NMYWTAGMSI KMQVETEDSS RITWLQGIIS SAAFTDHGPW RGSPWRMLQV IFCFFSVYLS 360 LSLSLSLSLS LSTCVMKVIY L

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MNSSMVYDLD PSVWKACAGS SVEIPVVDSR VYYFPQGHAE QASTTPDFSV VKYTKSFFLC  60
RIVSVQFLAN QDTDEVFVKI RLQPIDGSSG LVWSQGMRGS QGMRGEDVDN KETKISSFAK  120
ILTTSDANNG GGFSVPRFCA ESIFPPLNYK AGVPVQNISV RDVHGVFWEF RHIYRGTPRR  180
HLLTTGWSKF VNHKKLVAGD SVVFMKNQIG ELSVGIRRKV RLTESVDFGR WNCQNVRVVE  240
EECRGGELGF SRSVRGRVSA ESVLEAVELA GGNREFEVVW YPRAGSAEYV VKAEKVEESL  300
NMYWTAGMSI KMQVETEDSS RITWLQGIIS SAAFTDHGPW RGSPWRMLQV IFCFFSVYLS  360
LSLSLSLSLS LSTCVMKVIY L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77850.1	1e-108	ARF family protein