PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA06104.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family M-type_MADS
Protein Properties Length: 363aa    MW: 41865 Da    PI: 8.3524
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA06104.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF41.51.7e-131151343
                --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS
      SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsst 43
                i  +  r+ t++kR++g+ KK +E S+LC++++++ii++ +
  OVA06104.1 11 IAKEKSRYQTYIKRKKGLKKKIYEFSTLCGVDACMIIYGLK 51
                556778999*****************************965 PP
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    
MGRAKLNMEL IAKEKSRYQT YIKRKKGLKK KIYEFSTLCG VDACMIIYGL KQGDRPIEPE  60
IWPNNLDEAH RIIKRYHQVG KDDRGKRSLD LFDFFEDRKK KIEDELVKLR RRNGSLSWDD  120
RVNGFTVDQL RQLNDTLASK MEFIDARIAL MKGQECLSDG TTGVVKYSHE TQNQNPCYMP  180
SGTGGNNLHG TTWREDDILH TQPLRYAAPL DQHRSIMTMD NYPSDHPTMV PDNTHMMTPM  240
MAMNGYDYGH FSGGPIGNFS HPMVKNHPFL YDQTVMPSME DMEFTNRGSS TFRMQPMMMP  300
TPSIMQPCMM PMGSSSQMHP QPSIMQPCLM NTGSSSQMQN QPFNDLFDVQ DPLINKYKRG  360
RFL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11326KEKSRYQTYIKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G55690.13e-16M-type_MADS family protein