PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA06066.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

Protein Properties

Length: 942aa MW: 103704 Da PI: 6.967

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA06066.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.1	3.2e-18	311	411	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+kvl+ sd+++ grlvlpk +ae++ ++++e+ ++++d +g+ W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e++l+++ OVA06066.1 311 FEKVLSASDAGRIGRLVLPKACAEAYfpRISQPEGLPIRIQDVKGKDWVFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRID-PEGKLLMG 407 99************************666667778***********99899999999.*******************987.88888888 PP EE-S CS B3 96 vfrk 99 ++++ OVA06066.1 408 FRKA 411 8765 PP

Sequence ? help Back to Top
Protein Sequence Length: 942 aa Download sequence
MASKICMNVL CGSKSSIQWK KGWKLRSGGS ATLCDKCGSV YEQLIFCDTF HLKETGWRGC 60 SSCGKRLHCG CIASKSFLEL LDDGGVECIS CLRSSEFSYI RRDEEPNGCG TWSADNVGET 120 QSTSLGNKID GIDREKLMYF GISMEGDRQI NLLQSQKDDT NGSLRQIKRE QVMSPIGDVR 180 STGFSNLERA FIGSLGQNCL SMTLGSPSGT PNLALRVPGV LVDPREQNKL ASPFQQGPKS 240 CHVAPKPLKI GPGSGSGSEA SKDVLPQVRV ARPPVEGRGR TQLLPRYWPK ITDQELQQIA 300 GDSNSTIVPL FEKVLSASDA GRIGRLVLPK ACAEAYFPRI SQPEGLPIRI QDVKGKDWVF 360 QFRFWPNNNS RMYVLEGVTP CIQSMQLQAG DTVTFSRIDP EGKLLMGFRK ASNPVTMQQE 420 NHISAASNGT LPNENFVSGV IENQPVVSGY SSRLRSLKGS TGPQLSAVSE HLNSANGDIS 480 WRKTEEHAGW PSEGLPMQPL LVPEKKRSRN IGSKSKRLLM DTEDALELKL TWEEAQDLLR 540 PPPTVKPSIV KIEDHEFEEY EEPPVFGKKT IFTARPSGGQ DQWAQCDSCS RWRRMPADVL 600 LPPKWTCVDN AWDPERCSCS APDEMSPKEL DNFLRLNLDV KRRRVTASHR QECEPSALDA 660 LATVAVLGDN GGDPGVPSVA TTTRHPRHRP GCTCIVCIQP PSGKGPKHKP TCTCNVCMTV 720 KRRFETLMMR KKKRQEHAVE IAQKKPNISW GPPNKDEVEG ESVSRCKMLP LDPRDGEARP 780 SDEFETGGGR SKTFADQATE INMGQIDLNC DPDRDQVELP QPRSSSMPVS MTSLVKVATL 840 PLDTYLKQNG LTSLTCNHQA SLSSHAAVPQ EVSSRDNEGR PPPDENDVTL VQEREMEGGN 900 EGHCVQDQTT DDANLGSIQS LQASYNLKSE KKSLDDDIGS LQ

Sequence ? help Back to Top

Protein Sequence Length: 942 aa Download sequence

MASKICMNVL CGSKSSIQWK KGWKLRSGGS ATLCDKCGSV YEQLIFCDTF HLKETGWRGC  60
SSCGKRLHCG CIASKSFLEL LDDGGVECIS CLRSSEFSYI RRDEEPNGCG TWSADNVGET  120
QSTSLGNKID GIDREKLMYF GISMEGDRQI NLLQSQKDDT NGSLRQIKRE QVMSPIGDVR  180
STGFSNLERA FIGSLGQNCL SMTLGSPSGT PNLALRVPGV LVDPREQNKL ASPFQQGPKS  240
CHVAPKPLKI GPGSGSGSEA SKDVLPQVRV ARPPVEGRGR TQLLPRYWPK ITDQELQQIA  300
GDSNSTIVPL FEKVLSASDA GRIGRLVLPK ACAEAYFPRI SQPEGLPIRI QDVKGKDWVF  360
QFRFWPNNNS RMYVLEGVTP CIQSMQLQAG DTVTFSRIDP EGKLLMGFRK ASNPVTMQQE  420
NHISAASNGT LPNENFVSGV IENQPVVSGY SSRLRSLKGS TGPQLSAVSE HLNSANGDIS  480
WRKTEEHAGW PSEGLPMQPL LVPEKKRSRN IGSKSKRLLM DTEDALELKL TWEEAQDLLR  540
PPPTVKPSIV KIEDHEFEEY EEPPVFGKKT IFTARPSGGQ DQWAQCDSCS RWRRMPADVL  600
LPPKWTCVDN AWDPERCSCS APDEMSPKEL DNFLRLNLDV KRRRVTASHR QECEPSALDA  660
LATVAVLGDN GGDPGVPSVA TTTRHPRHRP GCTCIVCIQP PSGKGPKHKP TCTCNVCMTV  720
KRRFETLMMR KKKRQEHAVE IAQKKPNISW GPPNKDEVEG ESVSRCKMLP LDPRDGEARP  780
SDEFETGGGR SKTFADQATE INMGQIDLNC DPDRDQVELP QPRSSSMPVS MTSLVKVATL  840
PLDTYLKQNG LTSLTCNHQA SLSSHAAVPQ EVSSRDNEGR PPPDENDVTL VQEREMEGGN  900
EGHCVQDQTT DDANLGSIQS LQASYNLKSE KKSLDDDIGS LQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	641	645	KRRRV
2	721	734	KRRFETLMMRKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein