PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA06047.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 237aa MW: 26763.7 Da PI: 6.4044

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA06047.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.9	2e-07	27	73	3	47
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 +W+ d+++ +a ++ + +W +Ia ++ g+t+ ++ +++q + OVA06047.1 27 SWSRMQDKQFEKALVVFPEEtpdRWQKIATQVP-GKTPMEVWEHYQVL 73 7***************99*********.*********976 PP
2	Myb_DNA-binding	42.7	1.3e-13	128	172	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E+ ++ + +++G+g+W++I+r ++Rt+ q+ s+ qky OVA06047.1 128 PWTEQEHRAFLIGLQKYGKGDWRSISRNAVQTRTPTQVASHAQKY 172 8*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MFNENLGFNG NQLPSPSSSS SYSSSSSWSR MQDKQFEKAL VVFPEETPDR WQKIATQVPG 60 KTPMEVWEHY QVLVHDLSEI EAGRVELPNY EDDLVPSNWD SELSPTSQIS FGSNKTKQSE 120 TERKKGVPWT EQEHRAFLIG LQKYGKGDWR SISRNAVQTR TPTQVASHAQ KYFLRLSAEK 180 KERKRSSIHD ITTVENTSIV QPNSQDLHVA PSNGPVQPTL MDPIGSFPGQ GDFFGHL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04760.1	8e-70	MYB family protein