PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA05949.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

GRF

Protein Properties

Length: 421aa MW: 45897 Da PI: 9.5344

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA05949.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	82.3	4.2e-26	149	192	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCsr+v++g+k+CErH+hrgr+rsrk++e OVA05949.1 149 DPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVE 192 79***************************************987 PP
2	QLQ	50.1	8.5e-18	76	111	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 F+ aQ+q+L+ Q+l++Ky++a++ +P+eLlq+i+k OVA05949.1 76 LFSIAQWQELELQALIFKYMLAGAAIPSELLQPIKK 111 6999******************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 421 aa Download sequence
MDYYHLREWR NKHQSDHSPA SAKIPRLLLE PPHQEASESS ALPLFVPEPS SRISSNLSAF 60 TDSTTTTSRV SRMIGLFSIA QWQELELQAL IFKYMLAGAA IPSELLQPIK KSLFNTSPPP 120 CHLHHPLQQF QHYQPAMLQS GYWGRTAVDP EPGRCRRTDG KKWRCSRDVV AGQKYCERHM 180 HRGRNRSRKP VEIPTRPTNT VTIAAAGGGG GLNTTTTTTT TTIPSVAALP ITTAIASNGG 240 NHFVLSGGGS SSSPSMDLLH LNQRYPESEP RNSEGRLDGQ VLRHFFDDWP KKSQQQQQQQ 300 HTNTNGGLDS NPDRTSSTSL SISIEGGSGD HHYHHPSSDF SLKLSTGIVV RDNESGRSSR 360 EGNNKGGIER SQLMNWGMSM GGGPLAEALR SSSTSHSSSP TSVLPPPPHG SGSESSSVVT 420 K

Sequence ? help Back to Top

Protein Sequence Length: 421 aa Download sequence

MDYYHLREWR NKHQSDHSPA SAKIPRLLLE PPHQEASESS ALPLFVPEPS SRISSNLSAF  60
TDSTTTTSRV SRMIGLFSIA QWQELELQAL IFKYMLAGAA IPSELLQPIK KSLFNTSPPP  120
CHLHHPLQQF QHYQPAMLQS GYWGRTAVDP EPGRCRRTDG KKWRCSRDVV AGQKYCERHM  180
HRGRNRSRKP VEIPTRPTNT VTIAAAGGGG GLNTTTTTTT TTIPSVAALP ITTAIASNGG  240
NHFVLSGGGS SSSPSMDLLH LNQRYPESEP RNSEGRLDGQ VLRHFFDDWP KKSQQQQQQQ  300
HTNTNGGLDS NPDRTSSTSL SISIEGGSGD HHYHHPSSDF SLKLSTGIVV RDNESGRSSR  360
EGNNKGGIER SQLMNWGMSM GGGPLAEALR SSSTSHSSSP TSVLPPPPHG SGSESSSVVT  420
K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52910.1	3e-58	GRF family protein