PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA05650.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

Trihelix

Protein Properties

Length: 361aa MW: 40121.6 Da PI: 10.2879

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA05650.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	48.4	2.5e-15	65	148	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ v L++a+++++ +r+klk+++We+v++++ +++ ++++qCk+k+e+++kry+ + s++p+f++l+ OVA05650.1 65 EWSEGAVSSLLDAYESKWVLRNRAKLKGQDWEDVARHVssraNSTKSPKTQTQCKNKIESMKKRYRSESSATDP------SSWPLFQRLD 148 5***********************************88777778889999**********98766654......56**9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MEKENPNSNQ DKLPSSLLNN NNNSKQQEDH PQPAAGLIIR NKPIVLSSTS GGGGGGGGDR 60 LKRDEWSEGA VSSLLDAYES KWVLRNRAKL KGQDWEDVAR HVSSRANSTK SPKTQTQCKN 120 KIESMKKRYR SESSATDPSS WPLFQRLDLL LRCRTATNNH PPSSTTTTTH HCPPLVLLDP 180 PIAPPPAPPP PPPPLPPPPP TTIGTRLDSH ESNDFDRVAG KEEEDLGAKI FDNGSDKISM 240 GMGSSGSTPV SDTIKEKMKM KKIKVEKKKM MKKKKKRPRR GEDWEVAESI RWLAEVVMRS 300 EQARMDAMKE VERMRIEAEA KKGEMDLKRT EIIANTQLQI AKILANNGNK DIDSSLRIGR 360 S

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MEKENPNSNQ DKLPSSLLNN NNNSKQQEDH PQPAAGLIIR NKPIVLSSTS GGGGGGGGDR  60
LKRDEWSEGA VSSLLDAYES KWVLRNRAKL KGQDWEDVAR HVSSRANSTK SPKTQTQCKN  120
KIESMKKRYR SESSATDPSS WPLFQRLDLL LRCRTATNNH PPSSTTTTTH HCPPLVLLDP  180
PIAPPPAPPP PPPPLPPPPP TTIGTRLDSH ESNDFDRVAG KEEEDLGAKI FDNGSDKISM  240
GMGSSGSTPV SDTIKEKMKM KKIKVEKKKM MKKKKKRPRR GEDWEVAESI RWLAEVVMRS  300
EQARMDAMKE VERMRIEAEA KKGEMDLKRT EIIANTQLQI AKILANNGNK DIDSSLRIGR  360
S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	261	278	KKIKVEKKKMMKKKKKRP
2	267	277	KKKMMKKKKKR
3	272	280	KKKKKRPRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54390.1	5e-53	Trihelix family protein