PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA05171.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

Protein Properties

Length: 396aa MW: 45457.3 Da PI: 5.6728

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA05171.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	45.9	1e-14	34	115	10	98
HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 +++rl lp+kf++++g++ s ++ + sg+ W v+l +k +g++ +++GW+e + ++ g f+vFk+dg+s+f +v +f+ OVA05171.1 34 IIENRRLGLPRKFVRKFGKE--LS-EVGVIIVSGKMWHVEL--SKADGEISFQNGWQEIMDYYSIRIGHFLVFKYDGNSRF--HVLIFD 115 56899**********844..55.8999999*****..********************************9999..999997 PP
2	B3	68.7	7.8e-22	300	390	4	98
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 ++ ps+v+++ +l +p +fa+++ ++k++s ltl+ ++gr+W+v + +++ + l kGWkeFv +n+L+egD+++F+l++r++fe +v++fr OVA05171.1 300 TMRPSYVSERFILNVPMDFAKAYLMQKTQS--LTLRVSDGRTWNVDC---VCGEFyTKLIKGWKEFVLDNHLEEGDICMFELVDRNSFETNVSIFR 390 5789*****************8887776..9999999****...44444366789********************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence
MRRQRMPNGC SSWMPSVQDE KKGSNFFRII HSFIIENRRL GLPRKFVRKF GKELSEVGVI 60 IVSGKMWHVE LSKADGEISF QNGWQEIMDY YSIRIGHFLV FKYDGNSRFH VLIFDMSASE 120 IEYPSHTEDF EEQNHERIPE TSASEIEYPI EENDAIENLD VTSACPTHGT NECDGQETSK 180 PMYLKPVSCL PFSLQGIAEN PSSNLKDEPE MVLVRSDSEG DGEPTMSTQL KCASSRGKDV 240 WYSTKKIDNP PESSRVGFSA PQVKRRNGHD HGFLRQQESS AKAIRTARAF TSEYPFCKIT 300 MRPSYVSERF ILNVPMDFAK AYLMQKTQSL TLRVSDGRTW NVDCVCGEFY TKLIKGWKEF 360 VLDNHLEEGD ICMFELVDRN SFETNVSIFR AFQDVV

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence

MRRQRMPNGC SSWMPSVQDE KKGSNFFRII HSFIIENRRL GLPRKFVRKF GKELSEVGVI  60
IVSGKMWHVE LSKADGEISF QNGWQEIMDY YSIRIGHFLV FKYDGNSRFH VLIFDMSASE  120
IEYPSHTEDF EEQNHERIPE TSASEIEYPI EENDAIENLD VTSACPTHGT NECDGQETSK  180
PMYLKPVSCL PFSLQGIAEN PSSNLKDEPE MVLVRSDSEG DGEPTMSTQL KCASSRGKDV  240
WYSTKKIDNP PESSRVGFSA PQVKRRNGHD HGFLRQQESS AKAIRTARAF TSEYPFCKIT  300
MRPSYVSERF ILNVPMDFAK AYLMQKTQSL TLRVSDGRTW NVDCVCGEFY TKLIKGWKEF  360
VLDNHLEEGD ICMFELVDRN SFETNVSIFR AFQDVV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	6e-50	B3 family protein