PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA05167.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family B3
Protein Properties Length: 304aa    MW: 34653.8 Da    PI: 9.3032
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA05167.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B354.91.6e-1757229100
                 -..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-SS CS
          B3  29 kkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrks 100
                 ++ees   +l+ +sg +W vkl  +k+ ++++l++GW++Fv+++ L+  +f+vF++dg+++f  +v++f+ks
  OVA05167.1   5 SEEESDRAILKGPSGSQWHVKL--CKTEDGTYLQDGWQDFVRDHSLCYYEFLVFRYDGNMCF--NVQIFDKS 72 
                 356777899*************..**************************************..*****985 PP
2B363.82.6e-20217299997
                 HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
          B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                 +v ++  l +pk f+++h   ++ s++++l++++g+ W v+l  + ++g+y + +GW  Fv+ n+L+egD+++F+l+g+ ef  +v++f
  OVA05167.1 217 NVRTRFVLNIPKGFCTAHL--PRFSTKIILRNPRGKDWFVNL--KYTGGKYSFVGGWTAFVRGNKLEEGDICIFELVGKCEF--CVHIF 299
                 566778899********96..56899****************..77778899*************************98888..99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MKHISEEESD RAILKGPSGS QWHVKLCKTE DGTYLQDGWQ DFVRDHSLCY YEFLVFRYDG  60
NMCFNVQIFD KSGCEREDAC SSKTQGLIFP IEKKFVSYAG KKRGKPPKRC AGSADLFPSR  120
DCYTGKKRGR QPKKFAGSAD LFPFRACQRD SGIEAVAEKR IKTEDVSMPT SERDSQARGC  180
LSRRKLKTEE EKAKVWKATE SFSSSCPYFA KCLNCYNVRT RFVLNIPKGF CTAHLPRFST  240
KIILRNPRGK DWFVNLKYTG GKYSFVGGWT AFVRGNKLEE GDICIFELVG KCEFCVHIFP  300
VGPL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-24B3 family protein