PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA05040.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

TCP

Protein Properties

Length: 370aa MW: 41980.5 Da PI: 8.9088

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA05040.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	129.6	3e-40	55	201	3	132
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...........ssssa...seceaesssssasnsss 87 kkdrhski T++g+RdRR+Rls+++a+ fF Lqd+LGfdk+skt+eWLl + k++i el ++ + sece +s+ sn++ OVA05040.1 55 SKKDRHSKIVTAQGLRDRRMRLSLKVARPFFSLQDMLGFDKASKTVEWLLMNCKQEINELKRSkhlsttkrscsG---DsytSECEVVSEIDIISNNTT 150 59***********************************************************998766655442...033455633333333332222 PP TCP 88 g......kaaksaakskksqksaasalnlakesrakarararertrekmri 132 + + +++k+ ++++++ +++ lakesrakarararert k + OVA05040.1 151 QvddhqqGNIGKKEKRVRRSRKPPTFHPLAKESRAKARARARERTIGKIWN 201 24444433333444666666667779****************9877655 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MINKNIIGII GGGNHVTEHF KTNNKKCRSS DLMITHGKIN TCSWNNNNNN NKRCSKKDRH 60 SKIVTAQGLR DRRMRLSLKV ARPFFSLQDM LGFDKASKTV EWLLMNCKQE INELKRSKHL 120 STTKRSCSGD SYTSECEVVS EIDIISNNTT QVDDHQQGNI GKKEKRVRRS RKPPTFHPLA 180 KESRAKARAR ARERTIGKIW NRSIPTMQYH PQGNNDYLHN NLNQLRSSTC SFEFEAADES 240 GSQSHDMKSS LEVVAEVEEP SSHSLEESIV ITSNSSVSHQ IFNYHQEIRT SQGLNLNNNN 300 NNNNSSSFAE NWDIDDASPN SSFCATSTGN VNDPISSPFS LTTSDARLPS QFIDFQFFDK 360 PWQTYNNESP

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MINKNIIGII GGGNHVTEHF KTNNKKCRSS DLMITHGKIN TCSWNNNNNN NKRCSKKDRH  60
SKIVTAQGLR DRRMRLSLKV ARPFFSLQDM LGFDKASKTV EWLLMNCKQE INELKRSKHL  120
STTKRSCSGD SYTSECEVVS EIDIISNNTT QVDDHQQGNI GKKEKRVRRS RKPPTFHPLA  180
KESRAKARAR ARERTIGKIW NRSIPTMQYH PQGNNDYLHN NLNQLRSSTC SFEFEAADES  240
GSQSHDMKSS LEVVAEVEEP SSHSLEESIV ITSNSSVSHQ IFNYHQEIRT SQGLNLNNNN  300
NNNNSSSFAE NWDIDDASPN SSFCATSTGN VNDPISSPFS LTTSDARLPS QFIDFQFFDK  360
PWQTYNNESP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67260.2	1e-24	TCP family protein