PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA04900.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

E2F/DP

Protein Properties

Length: 497aa MW: 55679.2 Da PI: 5.0324

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA04900.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	84.3	9.4e-27	177	242	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kfl+l+ ++++g+++ln+ a+ L +v ++RRiYDi+NVLe+++liek++kn+irwkg OVA04900.1 177 RYDSSLGLLTKKFLNLILEAKDGTLDLNKTADVL---EV--QKRRIYDITNVLEGIGLIEKTSKNNIRWKG 242 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 497 aa Download sequence
MSVSDEPSNP SNPQFQLNSQ TPQSPPPLVL GSLNRQFPFS SPKPPTFSPS SSFDCRRFIG 60 SSGDGGKAES VFTEIPLKQR NEKQDRVRTG QWVINQGQLE PVDSLVTSLS GMGCKRYQKT 120 SQGHTEAVNS PLRPMSATCI KRYSRSNASK NTRSGPQTAQ SNAGSASNIL TPTSSCRYDS 180 SLGLLTKKFL NLILEAKDGT LDLNKTADVL EVQKRRIYDI TNVLEGIGLI EKTSKNNIRW 240 KGIDMSRPME LDDEVSKLKA EIESIYDEER RLDVEIREKQ ERLRTLGADE NSQKFLFLTE 300 EDITSLPCYE NKTLIAIKAP QASSLEVPDP DEDINYPQKQ FRMMVRSTTG PIDVYLVSKY 360 QGRPEDIIVK RGGSMHHLSM NNSDYKSEAT FSRKAQDTGH DQDNQNISSE SPNSLGSVTG 420 IQKIVPSDAN IDDDYWFRSD LDVSITDLWV NEDWAQVGEL IQEDKFPVAS LTQHQTLPGV 480 VREEREFGMD SRCMEKT

Sequence ? help Back to Top

Protein Sequence Length: 497 aa Download sequence

MSVSDEPSNP SNPQFQLNSQ TPQSPPPLVL GSLNRQFPFS SPKPPTFSPS SSFDCRRFIG  60
SSGDGGKAES VFTEIPLKQR NEKQDRVRTG QWVINQGQLE PVDSLVTSLS GMGCKRYQKT  120
SQGHTEAVNS PLRPMSATCI KRYSRSNASK NTRSGPQTAQ SNAGSASNIL TPTSSCRYDS  180
SLGLLTKKFL NLILEAKDGT LDLNKTADVL EVQKRRIYDI TNVLEGIGLI EKTSKNNIRW  240
KGIDMSRPME LDDEVSKLKA EIESIYDEER RLDVEIREKQ ERLRTLGADE NSQKFLFLTE  300
EDITSLPCYE NKTLIAIKAP QASSLEVPDP DEDINYPQKQ FRMMVRSTTG PIDVYLVSKY  360
QGRPEDIIVK RGGSMHHLSM NNSDYKSEAT FSRKAQDTGH DQDNQNISSE SPNSLGSVTG  420
IQKIVPSDAN IDDDYWFRSD LDVSITDLWV NEDWAQVGEL IQEDKFPVAS LTQHQTLPGV  480
VREEREFGMD SRCMEKT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.3	1e-101	E2F/DP family protein