PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA04544.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family GRAS
Protein Properties Length: 541aa    MW: 60395.4 Da    PI: 5.5658
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA04544.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS319.85.8e-981825393373
        GRAS   3 elLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 ++L+++Ae v+ ++l+laq +Larl++  ++p g+p+qR a+yf+eAL++ l++      +  ++   s ++ ++++ a+k+fse+sPi+ f+++taNq
  OVA04544.1 182 DQLIRAAESVELNELQLAQVILARLNQPlQTPIGKPLQRTAFYFKEALQNFLTG------SNWAAHL-SASEIVQKIRAYKIFSEISPIPLFANFTANQ 273
                 68*************************88*************************......2222222.234589************************* PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRp....egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLr 195
                 a+lea +g+  +HiiDfdi+ G+QW++ +qa+a+++     ++pslRiT+v+++e  s+ e + ++++L++fA+elg++f+ ++++ +++e l ++++r
  OVA04544.1 274 ALLEASDGAMFIHIIDFDIGLGGQWASYMQAIACKAksreLPAPSLRITAVVPEE--SSMEASLIKDNLQQFARELGIRFQLEFVLFHSFEVLLFNAIR 370
                 *********************************8774443669**********66..999999************************************ PP

        GRAS 196 vkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh..nsesFlerflealeyysalfdsleaklpreseerikvErellgr 292
                 + +gE++aVnl+ +++rll+ s s++     +L++++++sP++vv+v++e     +s sF + f++ leyysal++sl+a  + + +  + +Er+ll+ 
  OVA04544.1 371 FINGETIAVNLSPSIFRLLSASDSIAG----FLRFLRRISPQIVVFVDNEGCKdsESFSFRRNFINGLEYYSALLESLDAANSGDVNLVRRIERFLLRS 465
                 *******************77777777....*******************554136668999****************999888889999********* PP

        GRAS 293 eivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                 +i  +va+  +           Wre ++ aG+ +vplse++++qa+ l+r+++ +g++v +++g+++l+W++r+Lv++SaW
  OVA04544.1 466 RIAGAVAAGRNC-------ILPWRELFSGAGLMSVPLSEFTESQADWLVRRTNIRGFHVAKRQGAMMLCWHERELVATSAW 539
                 *******98776.......899*********************************************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 541 aa     Download sequence    
MKSPFTTPQN NQNFHSKPLS NTTLNHPNTN NNTTTNQHSC YEPTSVLDLR RSPSPVAGGS  60
DSVPGFTALS TVSDESPLHW DDHANLHHHH PSVLLPSSED WDSMIWDLGL KDDSKNLLQF  120
GPLLEPLNPN PPLFTPQSDP FNPSLILTSD FNSSNQDLDF NSSINLGGID SNLHEFDCSQ  180
LDQLIRAAES VELNELQLAQ VILARLNQPL QTPIGKPLQR TAFYFKEALQ NFLTGSNWAA  240
HLSASEIVQK IRAYKIFSEI SPIPLFANFT ANQALLEASD GAMFIHIIDF DIGLGGQWAS  300
YMQAIACKAK SRELPAPSLR ITAVVPEESS MEASLIKDNL QQFARELGIR FQLEFVLFHS  360
FEVLLFNAIR FINGETIAVN LSPSIFRLLS ASDSIAGFLR FLRRISPQIV VFVDNEGCKD  420
SESFSFRRNF INGLEYYSAL LESLDAANSG DVNLVRRIER FLLRSRIAGA VAAGRNCILP  480
WRELFSGAGL MSVPLSEFTE SQADWLVRRT NIRGFHVAKR QGAMMLCWHE RELVATSAWM  540
C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36710.11e-124GRAS family protein