PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OVA04544.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
|
||||||||
Family | GRAS | ||||||||
Protein Properties | Length: 541aa MW: 60395.4 Da PI: 5.5658 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 319.8 | 5.8e-98 | 182 | 539 | 3 | 373 |
GRAS 3 elLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100 ++L+++Ae v+ ++l+laq +Larl++ ++p g+p+qR a+yf+eAL++ l++ + ++ s ++ ++++ a+k+fse+sPi+ f+++taNq OVA04544.1 182 DQLIRAAESVELNELQLAQVILARLNQPlQTPIGKPLQRTAFYFKEALQNFLTG------SNWAAHL-SASEIVQKIRAYKIFSEISPIPLFANFTANQ 273 68*************************88*************************......2222222.234589************************* PP GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRp....egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLr 195 a+lea +g+ +HiiDfdi+ G+QW++ +qa+a+++ ++pslRiT+v+++e s+ e + ++++L++fA+elg++f+ ++++ +++e l ++++r OVA04544.1 274 ALLEASDGAMFIHIIDFDIGLGGQWASYMQAIACKAksreLPAPSLRITAVVPEE--SSMEASLIKDNLQQFARELGIRFQLEFVLFHSFEVLLFNAIR 370 *********************************8774443669**********66..999999************************************ PP GRAS 196 vkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh..nsesFlerflealeyysalfdsleaklpreseerikvErellgr 292 + +gE++aVnl+ +++rll+ s s++ +L++++++sP++vv+v++e +s sF + f++ leyysal++sl+a + + + + +Er+ll+ OVA04544.1 371 FINGETIAVNLSPSIFRLLSASDSIAG----FLRFLRRISPQIVVFVDNEGCKdsESFSFRRNFINGLEYYSALLESLDAANSGDVNLVRRIERFLLRS 465 *******************77777777....*******************554136668999****************999888889999********* PP GRAS 293 eivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373 +i +va+ + Wre ++ aG+ +vplse++++qa+ l+r+++ +g++v +++g+++l+W++r+Lv++SaW OVA04544.1 466 RIAGAVAAGRNC-------ILPWRELFSGAGLMSVPLSEFTESQADWLVRRTNIRGFHVAKRQGAMMLCWHERELVATSAW 539 *******98776.......899*********************************************************** PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 541 aa Download sequence |
MKSPFTTPQN NQNFHSKPLS NTTLNHPNTN NNTTTNQHSC YEPTSVLDLR RSPSPVAGGS 60 DSVPGFTALS TVSDESPLHW DDHANLHHHH PSVLLPSSED WDSMIWDLGL KDDSKNLLQF 120 GPLLEPLNPN PPLFTPQSDP FNPSLILTSD FNSSNQDLDF NSSINLGGID SNLHEFDCSQ 180 LDQLIRAAES VELNELQLAQ VILARLNQPL QTPIGKPLQR TAFYFKEALQ NFLTGSNWAA 240 HLSASEIVQK IRAYKIFSEI SPIPLFANFT ANQALLEASD GAMFIHIIDF DIGLGGQWAS 300 YMQAIACKAK SRELPAPSLR ITAVVPEESS MEASLIKDNL QQFARELGIR FQLEFVLFHS 360 FEVLLFNAIR FINGETIAVN LSPSIFRLLS ASDSIAGFLR FLRRISPQIV VFVDNEGCKD 420 SESFSFRRNF INGLEYYSAL LESLDAANSG DVNLVRRIER FLLRSRIAGA VAAGRNCILP 480 WRELFSGAGL MSVPLSEFTE SQADWLVRRT NIRGFHVAKR QGAMMLCWHE RELVATSAWM 540 C |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G36710.1 | 1e-124 | GRAS family protein |