PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA04501.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family GRAS
Protein Properties Length: 618aa    MW: 68048.4 Da    PI: 4.572
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA04501.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS349.55.2e-1072496182374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal.ppsetseknsseelaalklfsevsPilkfshltaN 99 
                  + Ll+cA+ vs+++  +  +lL+r++e +s++gdp++R+a+yf e L  rl++  +++ ++   + e s    ++++ ++k++++++P+ kf+hltaN
  OVA04501.1 249 LKSLLDCAR-VSESEPDRSLKLLNRVRESVSEHGDPTERVAFYFSEVLYCRLVS--PKITNTQlIAFEPS---PEDVTLSYKALNDACPYSKFAHLTAN 341
                 5789****9.8888999*************************************..66555442333333...57888999****************** PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLr 195
                 qaIlea+++++r+Hi+Df+i qGlQW+aLlqaLa+R++g+p ++Ri g+ +p+ g   + +l +tg+rL++fA+ l+++fef++ + + +++l+ +++ 
  OVA04501.1 342 QAILEATASSSRIHILDFGIVQGLQWAALLQALATRSAGKPsMIRISGIPAPALGrsPAASLLATGNRLRDFAKLLDLNFEFEP-ILTPIDELNESSFP 439
                 *************************************7766599********99999999************************.799*********** PP

        GRAS 196 vkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgrei 294
                 v+++E+laVn++lql++lld++    +     L+l ksl+Pkvv++ e ea++n+ s+ +rf +al+yy a+f+sle +l+r+s+eri vEr llgr+i
  OVA04501.1 440 VESDEVLAVNFMLQLYNLLDSTPVAVE---GALRLAKSLNPKVVTLGEYEASLNRVSYYDRFKNALRYYLAVFESLEPNLARDSSERIRVERLLLGRRI 535
                 *******************77766666...8******************************************************************** PP

        GRAS 295 vnvva.cegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv.lgWkdrpLvsvSaWr 374
                   vv   eg  rrer+e+ ++W++ +e++GF++v+ls++  +qak ll +++ s  y++ e+   ++ l W d pL++vS+Wr
  OVA04501.1 536 AGVVGsDEGPIRRERMEENGQWKALMESCGFESVALSHYSISQAKILLWNYNySSKYSLMESPPGFLsLAWDDIPLLAVSSWR 618
                 ****6267888*****************************************9999***999777777**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 618 aa     Download sequence    
MAYMCTDSGN LMAIAQQVIQ QKQQQQQQQQ QQQQQQYQQQ QQQHQQFVGV INPFSWCGPP  60
QHPISSSPPP SFGFGLTGAG CSEPYPVGGV SDTGDSDPLS FPHLDHHSIG FRLSDLSGTA  120
GTEFESDEWM ESLISGGGGG GGDSTESSEL PSACDAWSNN PDFSMYSTDP FVSCSSRLTH  180
SSNQSDLCPL IFSDTQKNPN LLQPTWVPSP VLPPQDLPPL QNPPPQTLQK DPLTILSQSS  240
EAESASPLLK SLLDCARVSE SEPDRSLKLL NRVRESVSEH GDPTERVAFY FSEVLYCRLV  300
SPKITNTQLI AFEPSPEDVT LSYKALNDAC PYSKFAHLTA NQAILEATAS SSRIHILDFG  360
IVQGLQWAAL LQALATRSAG KPSMIRISGI PAPALGRSPA ASLLATGNRL RDFAKLLDLN  420
FEFEPILTPI DELNESSFPV ESDEVLAVNF MLQLYNLLDS TPVAVEGALR LAKSLNPKVV  480
TLGEYEASLN RVSYYDRFKN ALRYYLAVFE SLEPNLARDS SERIRVERLL LGRRIAGVVG  540
SDEGPIRRER MEENGQWKAL MESCGFESVA LSHYSISQAK ILLWNYNYSS KYSLMESPPG  600
FLSLAWDDIP LLAVSSWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66770.10.0GRAS family protein