PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA03614.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

GRF

Protein Properties

Length: 393aa MW: 42947.8 Da PI: 8.9894

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA03614.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	82	5.1e-26	146	189	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCsr+v++g+k+CErH+hrgr+rsrk++e OVA03614.1 146 DPEPGRCRRTDGKKWRCSRDVVPGQKYCERHVHRGRNRSRKPVE 189 79***************************************987 PP
2	QLQ	48.9	1.9e-17	74	109	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 F+ aQ+q+L+ Q+l++Ky++a++ vP eLlq i+k OVA03614.1 74 LFSLAQWQELELQALIFKYMLAGAAVPTELLQSIKK 109 69*******************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
MEYDLNQWRN QHQLEQQPSA KIPRLFLEAQ NTGSSSETAL PFFVPEPNSK ISSLSAFPDS 60 ITTAYRFPRL GGGLFSLAQW QELELQALIF KYMLAGAAVP TELLQSIKKS FLNTPACCLH 120 YPQQHYQHYQ PTAMLQSGYW GRGSMDPEPG RCRRTDGKKW RCSRDVVPGQ KYCERHVHRG 180 RNRSRKPVEI PTPAAAAGGG LKIANATIAS SSSSSPSTVV ASGNNFTLSG SPSIELLHLN 240 QRSSENKVGN RVLLETHNNK VPGEEKPDGQ ILRHFFDDWP RTNQESSGIG NNSSSATSTT 300 CLSISTPGNP SSDFSLKLST GNVDEPRESR EGNAGGERPH LNWGVGWGTH QVSSMGGPLA 360 EALRSSTTNS SPTSVLHELR RRGSLSETSS IST

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

MEYDLNQWRN QHQLEQQPSA KIPRLFLEAQ NTGSSSETAL PFFVPEPNSK ISSLSAFPDS  60
ITTAYRFPRL GGGLFSLAQW QELELQALIF KYMLAGAAVP TELLQSIKKS FLNTPACCLH  120
YPQQHYQHYQ PTAMLQSGYW GRGSMDPEPG RCRRTDGKKW RCSRDVVPGQ KYCERHVHRG  180
RNRSRKPVEI PTPAAAAGGG LKIANATIAS SSSSSPSTVV ASGNNFTLSG SPSIELLHLN  240
QRSSENKVGN RVLLETHNNK VPGEEKPDGQ ILRHFFDDWP RTNQESSGIG NNSSSATSTT  300
CLSISTPGNP SSDFSLKLST GNVDEPRESR EGNAGGERPH LNWGVGWGTH QVSSMGGPLA  360
EALRSSTTNS SPTSVLHELR RRGSLSETSS IST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52910.1	2e-66	GRF family protein