PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA03484.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family Trihelix
Protein Properties Length: 280aa    MW: 31618 Da    PI: 9.4819
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA03484.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix44.54.1e-1426116186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +W+++   +Liea  ++  +l+rg+l+ ++W+ev++++     + ++ +r+ +qCk++++ l+k+yk ++++  +   + +s++p++++l+
  OVA03484.1  26 CWSEDASYTLIEAWGDRYLELNRGNLRHKHWQEVADAVnarhgAVEKSRRTDVQCKNRMDTLKKKYKLERARVLSSGGTLTSSWPFYSRLD 116
                 7*************************************976666666789*****************9998877665666779*****997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MIIDGTAETV AISRPANHQF PGREDCWSED ASYTLIEAWG DRYLELNRGN LRHKHWQEVA  60
DAVNARHGAV EKSRRTDVQC KNRMDTLKKK YKLERARVLS SGGTLTSSWP FYSRLDSLIG  120
ISVPPKKVSS PVASLPLTYR KPLGAVPYAP EVKVGTQSAT EKRPLPLVPR NYSAVAAAAA  180
AAADSGLSRS SSESRHKDEE MDGVRELAQA IVRFGEIYER VEEARQRQLI ELEKQRMDCM  240
KSLEFERMQL FMDTQVELEK IKRAKRAVVN GERDSLIFLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.16e-61Trihelix family protein