PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA02695.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

NF-X1

Protein Properties

Length: 884aa MW: 98586.6 Da PI: 8.3215

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA02695.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	16	2.6e-05	198	216	1	20
zf-NF-X1 1 CGkHkCqklCHeGpCppCpq 20 CG H C lCH+GpCp+Cp+ OVA02695.1 198 CG-HYCLLLCHPGPCPSCPK 216 .*************96 PP
2	zf-NF-X1	16	2.6e-05	252	268	3	19
zf-NF-X1 3 kHkCqklCHeGpCppCp 19 +H C+++CHeG CppC+ OVA02695.1 252 IHGCSETCHEGLCPPCR 268 9***************8 PP
3	zf-NF-X1	17.2	1.1e-05	410	429	1	20
zf-NF-X1 1 CGkHkCqklCHeGpCppCpq 20 CG+H C + C+ G+CppC++ OVA02695.1 410 CGRHACRRRCCDGDCPPCSE 429 ******************85 PP
4	zf-NF-X1	18.1	5.8e-06	431	456	1	20
zf-NF-X1 1 CG......kHkCqklCHeGpCppCpq 20 CG +HkC ++CH+G C pCp+ OVA02695.1 431 CGrklrcnNHKCPSPCHRGACAPCPL 456 666666669***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 884 aa Download sequence
MFSGKLKVNA SEMASANKHL SPASDSDVDS DNSANGVDEL RHTDLEDTIF KSYLQITGRS 60 SPDLSKIKSF LTSSRSGALS CMICLERIRL SDPTWSCFSG CYAVFHLICI QSWARQASDL 120 AAERAISRLS REHFPLAAAK ALESSNWNCP KCRVEYSKTL IPNTYLCFCG KLDNPPSDPW 180 ILPHSCGEIC GRPLKYNCGH YCLLLCHPGP CPSCPKLVKT RCFCGKIEDV KRCGFKDFSC 240 NGVCSKKLDC EIHGCSETCH EGLCPPCRAK GVYKCQCGKL EEERECFERE FRCENPCERL 300 LGCGKHVCER GCHSGQCGGC PYQGKRSCPC GKKVYEGMPC DALLPTCGST CEKMLRCGIH 360 RCPERCHQGP CNETCRTVIM KYCRCGSLKK EVPCHQALAC ERKCQQLRDC GRHACRRRCC 420 DGDCPPCSEI CGRKLRCNNH KCPSPCHRGA CAPCPLMVTL SCSCGETRFE VPCGTEKEQK 480 PPKCLKSCRI SPLCRHGSDC KPHKCHYGAC PPCRLPCEEE FPCGHKCKLR CHGPKPAPNP 540 EFTLKPKKKK SNHQPECTPG SPCPPCPELV WRSCLGQHIG AEQMMVCSKT AAFSCQNLCG 600 NLLGCGNHYC TKPCHAMKSQ TSIADRHVRT ESCEECHLPC QKERELACPH PCPVPCHPGD 660 CSPCKVLIKR SCHCGSMVHV FECTYYNSLS ENEQLRIRSC GGPCHRKLPN CSHLCPEKCH 720 PGQCRLPEKC SKKVNVRCRC QNLKKEWLCQ DVQAAYCSIG CDPKDISKSQ FGIGLLPCNS 780 ECASKVKVVD SDLQLRKPKA SESKVTDAAK HVPKRRKRRE QVQEATQISR LQKIIATLRW 840 FLIFISIVVA VIAAAYYGYK GLLWLSDWMN EVEERRQSKR FPGI

Sequence ? help Back to Top

Protein Sequence Length: 884 aa Download sequence

MFSGKLKVNA SEMASANKHL SPASDSDVDS DNSANGVDEL RHTDLEDTIF KSYLQITGRS  60
SPDLSKIKSF LTSSRSGALS CMICLERIRL SDPTWSCFSG CYAVFHLICI QSWARQASDL  120
AAERAISRLS REHFPLAAAK ALESSNWNCP KCRVEYSKTL IPNTYLCFCG KLDNPPSDPW  180
ILPHSCGEIC GRPLKYNCGH YCLLLCHPGP CPSCPKLVKT RCFCGKIEDV KRCGFKDFSC  240
NGVCSKKLDC EIHGCSETCH EGLCPPCRAK GVYKCQCGKL EEERECFERE FRCENPCERL  300
LGCGKHVCER GCHSGQCGGC PYQGKRSCPC GKKVYEGMPC DALLPTCGST CEKMLRCGIH  360
RCPERCHQGP CNETCRTVIM KYCRCGSLKK EVPCHQALAC ERKCQQLRDC GRHACRRRCC  420
DGDCPPCSEI CGRKLRCNNH KCPSPCHRGA CAPCPLMVTL SCSCGETRFE VPCGTEKEQK  480
PPKCLKSCRI SPLCRHGSDC KPHKCHYGAC PPCRLPCEEE FPCGHKCKLR CHGPKPAPNP  540
EFTLKPKKKK SNHQPECTPG SPCPPCPELV WRSCLGQHIG AEQMMVCSKT AAFSCQNLCG  600
NLLGCGNHYC TKPCHAMKSQ TSIADRHVRT ESCEECHLPC QKERELACPH PCPVPCHPGD  660
CSPCKVLIKR SCHCGSMVHV FECTYYNSLS ENEQLRIRSC GGPCHRKLPN CSHLCPEKCH  720
PGQCRLPEKC SKKVNVRCRC QNLKKEWLCQ DVQAAYCSIG CDPKDISKSQ FGIGLLPCNS  780
ECASKVKVVD SDLQLRKPKA SESKVTDAAK HVPKRRKRRE QVQEATQISR LQKIIATLRW  840
FLIFISIVVA VIAAAYYGYK GLLWLSDWMN EVEERRQSKR FPGI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	813	819	PKRRKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G05660.1	0.0	NF-X1 family protein