PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA02529.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family GRAS
Protein Properties Length: 587aa    MW: 66828.1 Da    PI: 4.9236
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA02529.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS296.75.9e-912135852374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl.....fsevsPilkfsh 95 
                  +lLl+ Ae vs++++ la++lL++   l+s +g+p+qR++ yf+e+L++r+ r++ ++ ++++ ++ +++  +ee++++        +++ P+ ++ +
  OVA02529.1 213 AQLLLASAESVSNKQFDLASKLLTQCDYLSSCAGNPVQRVVYYFAEGLRERIDRETGRIPSKISREKGNQQLDIEEAMMTPNpellaCHKTLPFSQVLQ 311
                 689***************************************************999999999998888877777777763345556899********* PP

        GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlelee 193
                 l   qaI++ v+++++vH iD++i  G+Q   L+qaLasR + p   l+iT+vg     s++++eetg+rL++fAe+++ pf+f+v++ ++++ l+ e 
  OVA02529.1 312 LSGMQAIVDNVASASKVHLIDLGIRIGMQGTVLMQALASRHQCPIeLLKITAVGT----SRQKIEETGKRLESFAEAMNFPFKFKVVIISDMKVLKEEL 406
                 *****************************************6665499*******....9*************************************** PP

        GRAS 194 LrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres.eerikvErellg 291
                 ++++ +Ea+aV + l l +++ ++  le+    +++++++l+P ++v++e e +hns+sF++rf+eal  ysa+fd+lea +   + ++ri++Er + g
  OVA02529.1 407 FDTEADEAVAVYSPLLLRTMVTRPDRLEN----LMRVIRNLNPCIMVITEVEGNHNSPSFVNRFIEALFSYSAFFDCLEACMDDRNnQNRITIERLYYG 501
                 ***************99999977777777....*********************************************999876655************ PP

        GRAS 292 reivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 ++i+n+va+eg+er+ rh   ++Wr+ ++++G+ + +ls+    qa+l+l++v+ +   +++ + ++l+ gW++ p+ svSaW+
  OVA02529.1 502 QAIRNMVAMEGEERTFRHVGIATWRAFFTRFGMVETELSQASLYQANLILKQVAcWSSCTLDMNGKCLLVGWRGTPMHSVSAWK 585
                 ******************************************************9999*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 587 aa     Download sequence    
MNAVFSCEPC DFNGVQDVYG PIQNYGREER VNRGEQPHFF GIEEWEDINH LCPDYRFDQE  60
NPLEAEVLLP KYQELFSDFS MLDDFQLNME TPPIQSPQES TVLHSVLTEI SDFVEHNDNP  120
CPISLTSLEL LNNYTKKLKR LKGERLNELH NENTSSTVHD GGRLSTEEVI RVAGARLIQF  180
SSKKDDDLTV LMNRFGYSLS SLTNEEIRDV ELAQLLLASA ESVSNKQFDL ASKLLTQCDY  240
LSSCAGNPVQ RVVYYFAEGL RERIDRETGR IPSKISREKG NQQLDIEEAM MTPNPELLAC  300
HKTLPFSQVL QLSGMQAIVD NVASASKVHL IDLGIRIGMQ GTVLMQALAS RHQCPIELLK  360
ITAVGTSRQK IEETGKRLES FAEAMNFPFK FKVVIISDMK VLKEELFDTE ADEAVAVYSP  420
LLLRTMVTRP DRLENLMRVI RNLNPCIMVI TEVEGNHNSP SFVNRFIEAL FSYSAFFDCL  480
EACMDDRNNQ NRITIERLYY GQAIRNMVAM EGEERTFRHV GIATWRAFFT RFGMVETELS  540
QASLYQANLI LKQVACWSSC TLDMNGKCLL VGWRGTPMHS VSAWKFH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.11e-54GRAS family protein