PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA02528.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family GRAS
Protein Properties Length: 588aa    MW: 66792.1 Da    PI: 5.144
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA02528.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS293.65e-902145862374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl.....fsevsPilkfsh 95 
                  +lLl+ Ae vs++++ la++lL++   l+s++g+p+qRl+ yf eAL++r+ r++ ++ + +   + +++  +ee++++ +      +++ P+ ++ +
  OVA02528.1 214 AQLLLASAESVSNKQFDLASKLLTQCDYLSSSTGSPVQRLVYYFSEALQERIDRETGRIPSRVLEGKRNQHLDIEEAMMVPTpellaCHQTLPFSRLLQ 312
                 689***************************************************99999998877777777777777777556767789********** PP

        GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlelee 193
                 l   qa+ + v+++++vH iD++i  G+Q   L++aLa+R + p  +l+iT+vg      ++++e tg+rL++fAe++++pf f+v+  ++++dl+ e 
  OVA02528.1 313 LSGTQALIDNVATAKKVHLIDLGIRIGMQGTVLIHALATRHQCPIeHLKITAVGI----LSQKIEDTGKRLESFAEAMNLPFTFKVVFISDMKDLKEEL 407
                 ****************************************966545*********....89************************************** PP

        GRAS 194 LrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres.eerikvErellg 291
                 ++++ +Ea+aV + ++l  + +++ +les    +++++k+l+P ++vv+e e +hns+sF++rf+e+l +ysa+fd++ea +  ++ ++ri+ Er   g
  OVA02528.1 408 FDIEADEAIAVYSPVSLRMMIRRPDHLES----LMRVIKNLNPCIMVVTEIEGNHNSPSFVNRFIETLFFYSAFFDCFEACMDDQNnQNRITTERIHCG 502
                 *********************88888888....*********************************************99998877799********** PP

        GRAS 292 reivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 + i+n+va+eg+er+ rh    kWr+ ++++G+ + +ls++   qa+l+l++v+ +   +++ + ++l+ gWk+ p+ svSaW+
  OVA02528.1 503 QGISNIVAMEGEERTIRHVGIDKWRKFFKRFGMVETELSQSSLYQANLILKQVAcWSSCTLDMNGKCLIVGWKGTPINSVSAWK 586
                 ******************************************************9999*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 588 aa     Download sequence    
MNAVFSCDFN GAQDVYGPIQ GYGREERVNR GEQTHMFGIE DWDDINHLCP NYGFDQENTL  60
HTGVLLPKDQ DNLFSDFSML DDFQFNMGFP PIQPSQEFAV LHSVLTEKPD LVENKRVDNP  120
CPISLTSFEL LNNCTKRLKR LKGERLNELR NKTKATNVDN DGRLSTEEII RVACARFIQF  180
STKNDDDLTV VTNDQFGCSV PSLTDEEIRD VELAQLLLAS AESVSNKQFD LASKLLTQCD  240
YLSSSTGSPV QRLVYYFSEA LQERIDRETG RIPSRVLEGK RNQHLDIEEA MMVPTPELLA  300
CHQTLPFSRL LQLSGTQALI DNVATAKKVH LIDLGIRIGM QGTVLIHALA TRHQCPIEHL  360
KITAVGILSQ KIEDTGKRLE SFAEAMNLPF TFKVVFISDM KDLKEELFDI EADEAIAVYS  420
PVSLRMMIRR PDHLESLMRV IKNLNPCIMV VTEIEGNHNS PSFVNRFIET LFFYSAFFDC  480
FEACMDDQNN QNRITTERIH CGQGISNIVA MEGEERTIRH VGIDKWRKFF KRFGMVETEL  540
SQSSLYQANL ILKQVACWSS CTLDMNGKCL IVGWKGTPIN SVSAWKFH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.11e-55GRAS family protein