PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA02445.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | LBD | ||||||||
Protein Properties | Length: 211aa MW: 23471.6 Da PI: 7.6527 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 122.4 | 2.4e-38 | 12 | 112 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +C aCk+lrrkCa+dC++apyf++eq p++fa++hk+FGasn +kll++++ er +a+++++yeA+ar+rdPvyG+v++i++lqqq++ l+++l ++k OVA02445.1 12 PCGACKFLRRKCASDCIFAPYFCSEQgPAQFAAIHKVFGASNASKLLSQVQVPERCEAVATIAYEAQARIRDPVYGCVAHIFALQQQVAFLQTQLMQMK 110 7*************************99*******************************************************************9998 PP DUF260 99 ee 100 ++ OVA02445.1 111 AQ 112 87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MIMASVTGSG SPCGACKFLR RKCASDCIFA PYFCSEQGPA QFAAIHKVFG ASNASKLLSQ 60 VQVPERCEAV ATIAYEAQAR IRDPVYGCVA HIFALQQQVA FLQTQLMQMK AQLVYNTNGN 120 SRYLENNWTG NYITGAGSQN FSNNPTKYMY SISPQSSLDS IENENINIGI REEVQAYKDD 180 DLSFQTNCSK KIIFQNELNE LQAVALRMMR N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42430.1 | 8e-68 | LBD family protein |