PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA02102.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

CO-like

Protein Properties

Length: 390aa MW: 42984.8 Da PI: 4.9069

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA02102.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	25.1	3.6e-08	22	62	4	38
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 + C+ +++ + lfC+ ++ +lC +C +++H H+ OVA02102.1 22 KPCDSCKSASALLFCRADSAFLCISCDSNIHTAnklasrHE 62 68*****************************5556666666 PP
2	zf-B_box	25	3.9e-08	64	106	3	39
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 ++C+ +e+ +++ C+ + lC +C +H+ H++ OVA02102.1 64 VWMCEVCEQAPASVTCKADAASLCVTCDRDIHSAnplarrHER 106 689*****************************65777777775 PP
3	CCT	69.6	7.9e-24	319	362	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea++lRY+eKrk+RkFeK+irY+sRKa+Ae+RpR+KGrF+k++ OVA02102.1 319 REARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRT 362 9*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MVSEEEKRRG GFIGGGWSMS AKPCDSCKSA SALLFCRADS AFLCISCDSN IHTANKLASR 60 HERVWMCEVC EQAPASVTCK ADAASLCVTC DRDIHSANPL ARRHERFPVV PFYESAASAV 120 KSNAINFLVP DGDNHLLKPS DDDDDEDDTN DGETIREEAE AASWLLQNPN PKLMEAPDLK 180 SADYFFSDVD PYLDLDYAEI GGARFQNQND SVVPVQTEPI PVPLFNPASE NHCIDFDFSR 240 SKPSYSYNTQ SLSQSVSSSS LDVGVVPDGN CNSMADISKP YVMNLKNGID QFNNCGTNLA 300 TTAAAAANQQ ASQLSGLDRE ARVLRYREKR KNRKFEKTIR YASRKAYAET RPRIKGRFAK 360 RTEIEAEVDR IYTSAAALMV DSGYGIVPSF

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MVSEEEKRRG GFIGGGWSMS AKPCDSCKSA SALLFCRADS AFLCISCDSN IHTANKLASR  60
HERVWMCEVC EQAPASVTCK ADAASLCVTC DRDIHSANPL ARRHERFPVV PFYESAASAV  120
KSNAINFLVP DGDNHLLKPS DDDDDEDDTN DGETIREEAE AASWLLQNPN PKLMEAPDLK  180
SADYFFSDVD PYLDLDYAEI GGARFQNQND SVVPVQTEPI PVPLFNPASE NHCIDFDFSR  240
SKPSYSYNTQ SLSQSVSSSS LDVGVVPDGN CNSMADISKP YVMNLKNGID QFNNCGTNLA  300
TTAAAAANQQ ASQLSGLDRE ARVLRYREKR KNRKFEKTIR YASRKAYAET RPRIKGRFAK  360
RTEIEAEVDR IYTSAAALMV DSGYGIVPSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24930.1	1e-103	CO-like family protein