PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA01835.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

GATA

Protein Properties

Length: 518aa MW: 57851.7 Da PI: 4.7175

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA01835.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	45.7	8.9e-15	223	257	1	33
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkk 33 C++Cg ++ Tp +Rrgp g++tLCnaCGl+++ k OVA01835.1 223 CQHCGISEnsTPAMRRGPAGPRTLCNACGLMWANK 257 ***99999********************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 518 aa Download sequence
MVPVDRYCDA EMMPPENPQP LQSRPFDDHM QIPIQIDDDD GDDDDGGGYD DGDGGGDDET 60 EDDLRDVPVN SGRPGDYQNV ALPTRTSELT LAFEGEVYVF PSITYEKVQA VLLLLGGRDM 120 PTGVPTVDVS FHQNNRGVND APRRSNLSRR IASLVRFREK RKERCFDKKI RYNVRKEVAQ 180 RMHRKKGQFA SLKQGKQGSL NASSWDSSQS GLQDPPESVL RRCQHCGISE NSTPAMRRGP 240 AGPRTLCNAC GLMWANKVSM LGSEGLFDNQ CDMNCAMPSV PEQAFQDILT ITSRVATLTS 300 ILNDVYHISY AELLSRLLTL IGTLRDLTKS GRNIPSYQNE QEILGDSKPL TMDTRDSSAD 360 PDEQGTPEGV TVRTDNPFAN TDEQGSPVDT KPLPMEIRNP YVASEQETPE DLTKPVPVHI 420 ENSSANRDEQ SMYPVNLHGE IEILIVNPSS FLYLLASQPL VGLLGSFFEK SREFGVNLVT 480 LQQHILRRFQ TQINREATNF HMEKMAQDMM LVSHGRQT

Sequence ? help Back to Top

Protein Sequence Length: 518 aa Download sequence

MVPVDRYCDA EMMPPENPQP LQSRPFDDHM QIPIQIDDDD GDDDDGGGYD DGDGGGDDET  60
EDDLRDVPVN SGRPGDYQNV ALPTRTSELT LAFEGEVYVF PSITYEKVQA VLLLLGGRDM  120
PTGVPTVDVS FHQNNRGVND APRRSNLSRR IASLVRFREK RKERCFDKKI RYNVRKEVAQ  180
RMHRKKGQFA SLKQGKQGSL NASSWDSSQS GLQDPPESVL RRCQHCGISE NSTPAMRRGP  240
AGPRTLCNAC GLMWANKVSM LGSEGLFDNQ CDMNCAMPSV PEQAFQDILT ITSRVATLTS  300
ILNDVYHISY AELLSRLLTL IGTLRDLTKS GRNIPSYQNE QEILGDSKPL TMDTRDSSAD  360
PDEQGTPEGV TVRTDNPFAN TDEQGSPVDT KPLPMEIRNP YVASEQETPE DLTKPVPVHI  420
ENSSANRDEQ SMYPVNLHGE IEILIVNPSS FLYLLASQPL VGLLGSFFEK SREFGVNLVT  480
LQQHILRRFQ TQINREATNF HMEKMAQDMM LVSHGRQT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21175.2	1e-64	GATA family protein