PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA01772.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | MYB | ||||||||
Protein Properties | Length: 236aa MW: 26415.1 Da PI: 9.4827 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59.6 | 6.8e-19 | 45 | 90 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd+ l ++v q+G ++W++++r+++ gR++k+c++rw + OVA01772.1 45 KGPWSAEEDKVLTRLVDQHGARNWSLVSRYIP-GRSGKSCRLRWCNQ 90 79******************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 55.5 | 1.3e-17 | 99 | 141 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++ Ede++++a +++G++ W+tIar ++ gRt++ +k++w++ OVA01772.1 99 PFSPAEDEIILEAQAKYGNR-WATIARLLP-GRTDNAVKNHWNST 141 79******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MEPPNININT SSSTSLCSSS SSESDSSLAG GKQRRGGIRK SERIKGPWSA EEDKVLTRLV 60 DQHGARNWSL VSRYIPGRSG KSCRLRWCNQ LSPNVEHRPF SPAEDEIILE AQAKYGNRWA 120 TIARLLPGRT DNAVKNHWNS TLKRKQREHH HDHYDDHNNN INAGLNMGFR SSSSSSESDP 180 PTNLTLAPPG SSYFVPEVRQ PENVPAGFWD AMRDVIAREV RNYVSSSSFS EQSRSP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50060.1 | 4e-56 | MYB family protein |