PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA01723.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family MYB_related
Protein Properties Length: 91aa    MW: 10705.5 Da    PI: 10.1183
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA01723.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.61.3e-17956148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W++eEd ll ++++++G g W+ ++ + g++R++k+c++rw++yl
       OVA01723.1  9 KGAWSEEEDILLRKCIEKYGEGKWRQVPLKAGLNRCRKSCRLRWLNYL 56
                     79*********************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    
MEGSPGVRKG AWSEEEDILL RKCIEKYGEG KWRQVPLKAG LNRCRKSCRL RWLNYLCPNI  60
KRGEFTSDEV DLIIKMHKLL GNRQRNLYIQ A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.11e-41MYB family protein