PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA01709.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | GRAS | ||||||||
Protein Properties | Length: 605aa MW: 65605 Da PI: 4.7579 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 462.4 | 2.6e-141 | 237 | 600 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 lv++L++cAea+++++l+ a +l++++ la +++ +m+++a+yf+eALa+r++r l p+++ +++ se l f+e++P+lkf+h+taN OVA01709.1 237 LVHTLMACAEALQQDNLTVAGQLVKQIGLLAVSQAGAMRKVATYFAEALARRIYR--------LYPQDSLDSSFSEILE--MHFYETCPYLKFAHFTAN 325 689****************************************************........5566665444444443..46**************** PP GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198 qaIlea++g++rvH+iDf+++qG+QWpaL+qaLa Rp+gpp++R+Tg+g+p+++++++l+++g++La+fAe+++v+fe++ +va++l+dl+ ++L+++p OVA01709.1 326 QAILEAFAGKNRVHVIDFSMKQGVQWPALMQALALRPGGPPTFRLTGIGPPQPDNTDALQQVGWKLAQFAERIHVEFEYRGFVANSLADLDASMLDIRP 424 *************************************************************************************************** PP GRAS 199 ..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl.eaklpreseerikvErellgrei 294 Ea+aVn+v++lhrll++++++e+ vL+ +k+++Pk+v++veqea+hn++ Fl+rf+e+l+yys+lfdsl ++++ +++++++++++lgr+i OVA01709.1 425 seIEAVAVNSVFELHRLLNRPGAIEK----VLSSIKEMKPKIVTIVEQEANHNGPVFLDRFTESLHYYSTLFDSLeGCGMSPPDSQDQVMSEVYLGRQI 519 8889**********************....*********************************************88899999**************** PP GRAS 295 vnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374 +nvvaceg +r+erhetl++Wr r+e+aGF pv+l+++a kqa++ll+ ++ +dgy+vee++g+l+lgW++rpL+++SaW+ OVA01709.1 520 CNVVACEGVDRVERHETLSQWRGRMESAGFAPVHLGSNAFKQASMLLALFAgGDGYMVEENNGCLMLGWHTRPLIATSAWQ 600 ********************************************************************************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 605 aa Download sequence |
MKREHQESSS GGGGGGGIGG GGGVGGVGGS GSGVYSMMDT GKSKMWEESS QLDAGVDELL 60 AGLGYKVRSS DMAEVAQKLE QLEMVMGNAP EDVILSHLSG DTVHYNPSDL ASWLQSMLSE 120 LNPPSNFDLP LIQPQLIDDP LLPPAESSTI TTVEFSNSRQ NQHQQQQIYE EHSSDYDLRA 180 IPGGAICEPD KKRLKPSTAS GSASSSSAAA GIGSSCLTTE STRPVVLIDS QETGIRLVHT 240 LMACAEALQQ DNLTVAGQLV KQIGLLAVSQ AGAMRKVATY FAEALARRIY RLYPQDSLDS 300 SFSEILEMHF YETCPYLKFA HFTANQAILE AFAGKNRVHV IDFSMKQGVQ WPALMQALAL 360 RPGGPPTFRL TGIGPPQPDN TDALQQVGWK LAQFAERIHV EFEYRGFVAN SLADLDASML 420 DIRPSEIEAV AVNSVFELHR LLNRPGAIEK VLSSIKEMKP KIVTIVEQEA NHNGPVFLDR 480 FTESLHYYST LFDSLEGCGM SPPDSQDQVM SEVYLGRQIC NVVACEGVDR VERHETLSQW 540 RGRMESAGFA PVHLGSNAFK QASMLLALFA GGDGYMVEEN NGCLMLGWHT RPLIATSAWQ 600 LVSAD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01570.1 | 0.0 | GRAS family protein |