PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA01576.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

Protein Properties

Length: 756aa MW: 84671.2 Da PI: 5.5472

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA01576.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	61.1	1.8e-19	616	712	2	95
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 +kvl++sdv+++gr+vlpkk ae++ +++ + ++ + +ed ++r W++++++ ++ks++y+l+ ++ +Fv++ngL+egDf+v++ ++ +++++++ OVA01576.1 616 QKVLKQSDVGNLGRIVLPKKEAETYlpELEARDGISIAMEDiGTSRIWNMRYRFwpNNKSRMYLLE-NTGDFVRSNGLQEGDFIVIY--SDiKGGKYMI 711 79***********************999999****7778***99777777777777.******************..6778998887 PP E CS B3 95 k 95 + OVA01576.1 712 R 712 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 756 aa Download sequence
MKDMQVLHEH DEEDQQKHDH QGDLKDGLVF ENDIIIPNPN SYETMNWEEE VMAAEDLLDV 60 DDTLMSYGDF PPLPDFPCIS SSSSSSSSSC SSSAHHPVNI SHNHHAVTCS NNNSSSSSAS 120 SSSSASSSAS WAVVKPDHGE ESVENRQDYA LLSTDSMEIH QDEINRMDSA DCMDVMEGLG 180 DMDLLDTDDI WDPSSLFPYE DDQDYHDQQQ VQNHEQEEKL LVEIERGHDD DEEEEEKENN 240 NNKPSEDLAL VFLEWLKSNK ESISAEDLRS IKLKRSTIES AAQKLGGGKE GMKQLLKLIL 300 EWVQNHHLQK KRMKEGQASS IQNYHQENPN ANSSEHLNYN SFTPESNPCF NTPIPSTPWN 360 ITHHPQPPPP YVSDPMMSGS PSSYPTPTMH GFMGDPSLFV PHFNQNPYSS SSDYMLDSSQ 420 NWPPPPPPPP PHFSLSSHYT SYPADSHHHL APSQPPPPPP PPTLSRSFSN YQNQYPPCHQ 480 MFQGSPGDGS LIKLGSSATK EARKKRMARQ RRFFSHHQRH NQQPQHHHHH QTNTEQQTRL 540 VSDNNCTTTT QAANNQANWV YWSSSPPSAA AAGAVSMSPM LVSDGPPPPA DPPPMQTPNY 600 QRQGCKPEKN LKFLLQKVLK QSDVGNLGRI VLPKKEAETY LPELEARDGI SIAMEDIGTS 660 RIWNMRYRFW PNNKSRMYLL ENTGDFVRSN GLQEGDFIVI YSDIKGGKYM IRGVKVRQPG 720 SKSEAKKSAK AHRNLHPNSP GCDGSSSSSM IKQAVA

Sequence ? help Back to Top

Protein Sequence Length: 756 aa Download sequence

MKDMQVLHEH DEEDQQKHDH QGDLKDGLVF ENDIIIPNPN SYETMNWEEE VMAAEDLLDV  60
DDTLMSYGDF PPLPDFPCIS SSSSSSSSSC SSSAHHPVNI SHNHHAVTCS NNNSSSSSAS  120
SSSSASSSAS WAVVKPDHGE ESVENRQDYA LLSTDSMEIH QDEINRMDSA DCMDVMEGLG  180
DMDLLDTDDI WDPSSLFPYE DDQDYHDQQQ VQNHEQEEKL LVEIERGHDD DEEEEEKENN  240
NNKPSEDLAL VFLEWLKSNK ESISAEDLRS IKLKRSTIES AAQKLGGGKE GMKQLLKLIL  300
EWVQNHHLQK KRMKEGQASS IQNYHQENPN ANSSEHLNYN SFTPESNPCF NTPIPSTPWN  360
ITHHPQPPPP YVSDPMMSGS PSSYPTPTMH GFMGDPSLFV PHFNQNPYSS SSDYMLDSSQ  420
NWPPPPPPPP PHFSLSSHYT SYPADSHHHL APSQPPPPPP PPTLSRSFSN YQNQYPPCHQ  480
MFQGSPGDGS LIKLGSSATK EARKKRMARQ RRFFSHHQRH NQQPQHHHHH QTNTEQQTRL  540
VSDNNCTTTT QAANNQANWV YWSSSPPSAA AAGAVSMSPM LVSDGPPPPA DPPPMQTPNY  600
QRQGCKPEKN LKFLLQKVLK QSDVGNLGRI VLPKKEAETY LPELEARDGI SIAMEDIGTS  660
RIWNMRYRFW PNNKSRMYLL ENTGDFVRSN GLQEGDFIVI YSDIKGGKYM IRGVKVRQPG  720
SKSEAKKSAK AHRNLHPNSP GCDGSSSSSM IKQAVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	1e-71	B3 family protein