PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OVA01557.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 392aa MW: 44046.6 Da PI: 6.6457 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.4 | 7.1e-18 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l+++++ +G g+W+++++ g+ R++k+c++rw +yl OVA01557.1 13 RGLWSPEEDEKLIRCITTHGHGCWSSVPKLAGLQRCGKSCRLRWINYL 60 788*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 49.9 | 7.2e-16 | 66 | 109 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E+ ++d+++ lG++ W+ Ia++++ gRt++++k++w++ OVA01557.1 66 RGSFSPQEERVIIDVHRILGNR-WAQIAKHLP-GRTDNEVKNFWNS 109 899*******************.*********.***********96 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 392 aa Download sequence |
MGHHCCSKQK VKRGLWSPEE DEKLIRCITT HGHGCWSSVP KLAGLQRCGK SCRLRWINYL 60 RPDLKRGSFS PQEERVIIDV HRILGNRWAQ IAKHLPGRTD NEVKNFWNSC IKKKLIAQGL 120 DPKTHNLMIS SSSSYHHHHQ STASIVNNNN ACNNLNNHIY QQPTSVFPVN SQIILRDPSM 180 EYMMNPPAAA PYVTLLPHPP PPHPLHEAIS IPTNNFDYQN PNLVWTGKDQ NSNASMGLAN 240 CPPLMETKPT SYSSVNPPGF EFTEENCLWG TTTTTSTGIS GTIDHQSFVL PRLQVAAVQP 300 PPPPEEEQQI KQIQQKKAAV FEVVVDEFDE TNEVVLMNNK DGGSHDQEME MSTTSFNSSN 360 FDLEFMDSTI MSCGMYSNMN SSSSMDQLAW DC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G12720.1 | 2e-81 | MYB family protein |