PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA01325.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

bHLH

Protein Properties

Length: 489aa MW: 51419 Da PI: 6.5725

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA01325.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.8	7e-12	287	332	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq OVA01325.1 287 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 332 99*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 489 aa Download sequence
MQGMASMRNC LNSSSQISLQ ELQNGQQQQQ QQQQIQNPQM QVQGSHFDHP THDDFLDQML 60 SNLPSWSELK SPWELNSQNP NGNSTSNNNS NNNHHKLFNI PIGGNKSLDL SEDPSGSQPE 120 NLHYPCDDST VLASRLRQHQ ISGNSPKSMV LQQQLLLSGA GAGGMSRSPS SASGMGGDSV 180 LFPLPLTLGS GDSSDVVDAP FKTSNPTGEG SVQGLFNGIT GGLPRTGQAA NQQHFHHPQT 240 GSISTPNFGA PATGMNQVQA VASAGGGVTA PTRQKVRARR GQATDPHSIA ERLRRERIAE 300 RMKALQELVP NANKTDKASM LDEIIDYVKF LQLQVLSMSR LGGAAAVAPL VADMSSEGGG 360 DCIQASGGIG RNGNGNQTAS PNDSLTVTEH KVAKLMEEDM GSAMQYLQGK GLCLMPISLA 420 TAISTATAHS RNPSNNNNNI MNNPLLAAAS NADGPPSPSM SVLTVQSATM GNGGADQTSV 480 KDATSVSKP

Sequence ? help Back to Top

Protein Sequence Length: 489 aa Download sequence

MQGMASMRNC LNSSSQISLQ ELQNGQQQQQ QQQQIQNPQM QVQGSHFDHP THDDFLDQML  60
SNLPSWSELK SPWELNSQNP NGNSTSNNNS NNNHHKLFNI PIGGNKSLDL SEDPSGSQPE  120
NLHYPCDDST VLASRLRQHQ ISGNSPKSMV LQQQLLLSGA GAGGMSRSPS SASGMGGDSV  180
LFPLPLTLGS GDSSDVVDAP FKTSNPTGEG SVQGLFNGIT GGLPRTGQAA NQQHFHHPQT  240
GSISTPNFGA PATGMNQVQA VASAGGGVTA PTRQKVRARR GQATDPHSIA ERLRRERIAE  300
RMKALQELVP NANKTDKASM LDEIIDYVKF LQLQVLSMSR LGGAAAVAPL VADMSSEGGG  360
DCIQASGGIG RNGNGNQTAS PNDSLTVTEH KVAKLMEEDM GSAMQYLQGK GLCLMPISLA  420
TAISTATAHS RNPSNNNNNI MNNPLLAAAS NADGPPSPSM SVLTVQSATM GNGGADQTSV  480
KDATSVSKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	292	297	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	5e-57	bHLH family protein