PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA01070.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

ARF

Protein Properties

Length: 763aa MW: 85076.8 Da PI: 6.3226

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA01070.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	70.7	1.9e-22	175	275	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f+k+lt sd++++g +++ +++a+++ ++++ ++l+ +d++g++W +++i+r++++r++lt+GW+ Fv++++L +gD ++F + +++el OVA01070.1 175 FCKTLTASDTSTHGGFSVLRRHADDClppldmsQHPP--WQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFL--RGENGEL 269 99***************************654444..458*********************************************..449999 PP EEEEE- CS B3 93 vvkvfr 98 +v+v+r OVA01070.1 270 RVGVRR 275 ****97 PP
2	Auxin_resp	108	1e-35	301	383	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha++t++ F+v+Y+Pr+s+seF+v+v+k+++a ++k+svGmRfkm+fe+e+++err+sGt++gv + + W++S+WrsLk OVA01070.1 301 ASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARDQKLSVGMRFKMRFEGEEAPERRFSGTIIGVGENASRCWTDSEWRSLK 383 789******************************************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 763 aa Download sequence
MLPDSRLKIK GQIFVTDRAA ISRHQCQNSD LQSLPFEKRD LLGFVFMAFA PSNHSSSVEG 60 PNPGPFGDGL YRELWHACAG PLVSVPLEGE RVYYFPQGHM EQLEASTHQP LDKQMPSFNL 120 PSKILCKVVH VQLRAEPETD EVYAQITLLP ESDQSEVTSP DPPPPEPPRC IVHSFCKTLT 180 ASDTSTHGGF SVLRRHADDC LPPLDMSQHP PWQELVATDL HGNEWHFRHI FRGQPRRHLL 240 TTGWSVFVSS KRLVAGDAFI FLRGENGELR VGVRRLMRQL SNMPSSVISS HSMHLGVLAT 300 ASHAIATGTL FSVFYKPRTS RSEFIVSVNK YLEARDQKLS VGMRFKMRFE GEEAPERRFS 360 GTIIGVGENA SRCWTDSEWR SLKVQWDEPS SIPRPDRVSP WELEPLVAAT PPTSQPAQRN 420 KRARPPVLPS PTPDLSVFGM WKSPVESPSN FSHSDLQRGR DLYQLPNPTS PFSSLTKAST 480 LGFTGNSSPL AVSSNSRYWS NQTETPTDSF TPITNRESSE KRQETGNGYR LFGIQLVDNT 540 TVEENLQVVT VLGGVGEDQP VISVDAESDR QSQPSNINRS DIPTVSSDPE KSCLRSPQEM 600 QSRQTRSCTK VHMQGIAVGR AVDLTRFDCY EDLLRKLEGM FSIEGELCGP SKKWQVVYTD 660 DEDDMMMVGD DPWHEFCGMV RKIFIYTAEE VKRLSPKAKL PPVNSDIKPG KPESDIAVAT 720 TEDQSSVGRN GWPIGEEDAQ ARGGFVLLSS GLVQKDKEIG IHP

Sequence ? help Back to Top

Protein Sequence Length: 763 aa Download sequence

MLPDSRLKIK GQIFVTDRAA ISRHQCQNSD LQSLPFEKRD LLGFVFMAFA PSNHSSSVEG  60
PNPGPFGDGL YRELWHACAG PLVSVPLEGE RVYYFPQGHM EQLEASTHQP LDKQMPSFNL  120
PSKILCKVVH VQLRAEPETD EVYAQITLLP ESDQSEVTSP DPPPPEPPRC IVHSFCKTLT  180
ASDTSTHGGF SVLRRHADDC LPPLDMSQHP PWQELVATDL HGNEWHFRHI FRGQPRRHLL  240
TTGWSVFVSS KRLVAGDAFI FLRGENGELR VGVRRLMRQL SNMPSSVISS HSMHLGVLAT  300
ASHAIATGTL FSVFYKPRTS RSEFIVSVNK YLEARDQKLS VGMRFKMRFE GEEAPERRFS  360
GTIIGVGENA SRCWTDSEWR SLKVQWDEPS SIPRPDRVSP WELEPLVAAT PPTSQPAQRN  420
KRARPPVLPS PTPDLSVFGM WKSPVESPSN FSHSDLQRGR DLYQLPNPTS PFSSLTKAST  480
LGFTGNSSPL AVSSNSRYWS NQTETPTDSF TPITNRESSE KRQETGNGYR LFGIQLVDNT  540
TVEENLQVVT VLGGVGEDQP VISVDAESDR QSQPSNINRS DIPTVSSDPE KSCLRSPQEM  600
QSRQTRSCTK VHMQGIAVGR AVDLTRFDCY EDLLRKLEGM FSIEGELCGP SKKWQVVYTD  660
DEDDMMMVGD DPWHEFCGMV RKIFIYTAEE VKRLSPKAKL PPVNSDIKPG KPESDIAVAT  720
TEDQSSVGRN GWPIGEEDAQ ARGGFVLLSS GLVQKDKEIG IHP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G59750.4	0.0	ARF family protein