PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA01044.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

SBP

Protein Properties

Length: 1082aa MW: 120448 Da PI: 8.0899

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA01044.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130	8.3e-41	162	239	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv++C+ dls+ak+yhrrhkvCevhsk++++lv +++qrfCqqCsrfh lsefDe+krsCrrrLa+hn+rrrk+q+ OVA01044.1 162 MCQVDDCKGDLSNAKDYHRRHKVCEVHSKTTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQP 239 6**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1082 aa Download sequence
MEEVGAQIAH PIFIHQSLPG RFCEAPTMAR KRDLPWQNPN FLQQQQQQQQ QQQYQQRFQN 60 PKGNWNPNGW DWDRVMFIAK PSEAEVMQMG PAAAAVVEHE QKNKVGETLN PLVMKKSAVD 120 EDGENLTLKL GGNLYSTEEN TPRPNKRVRS GSPGGGGGSY PMCQVDDCKG DLSNAKDYHR 180 RHKVCEVHSK TTKALVGKQM QRFCQQCSRF HPLSEFDEGK RSCRRRLAGH NRRRRKTQPE 240 DVSSRLVLPG NQDNPSNGNL DVVNLLAALA RLQGNNVEKA IPDKDRLIQI LSKIASPPVA 300 SNSASRSPVP GGFDLNVSQE VSSEHQNKMN GIASGPSTMD LLAVLSTLAG SSPDALAFLS 360 QRSSLSSDDK TKLNCLDKAA GFNLQKKPVP GFSSVGGERS STSYQSPVEV SDGHVQVARP 420 NLPLQLFSSS PDDDSPPKMG SAWKYFSSDS SNPMESPSSS PPVVQKLFPM QTASEIMKRE 480 RMSISGEDNG TVEVSTTRGW NSPLELFKGP NGRVENSSVQ NLPYQGGYAS SSGSDHSPSS 540 SNSDAQNRTG RIIFKLFDKD PSNFPGTLRT QILEWLSHSP SEMEGYIRPG CVVLSIYISM 600 PSTAWEQLQE DLFQRVNFLV QDLDPDFWRN GRFLVHTDRQ LASYKDGKVR LCKSWRTWSA 660 PEIMFVSPLA VVCGQETSLS LRGRNLSVPG TKIHCTYMGG YLSKEVLGSV GTVYDDTSTE 720 SFKFPGGFPK ILGRCFIEVE NGFKGNSFPV IIADAAICQE LKLLESEFKE DARVGDIISE 780 DQMQDLERPR SREDCLYFLN ELGWLFQRKN TPYSDCPDFS HTRFKFLFTF SVERDWCTLI 840 KTLLDILVER NMGKDGLLRD SLEMLSEIHL LNRAVKRKCR KMVDLLIHYS VSSSTDASKK 900 YLFPPNQTGP GGVTPLHLAA CTHDSKEMVD ALTNDPQEIG LNCWNSLLDT SGQSPYAYAS 960 ARNNHYYNRL VAQKLTDRKH GQVSISVMEG TSLDQSWIVA EESEKANPQR PKSQKPCGKC 1020 AIAATRYYKR MPGYQGLLHR PYVHSMLAIA AVCVCVCLFL RGSPDIGSVA PFKWENLHFG 1080 TS

Sequence ? help Back to Top

Protein Sequence Length: 1082 aa Download sequence

MEEVGAQIAH PIFIHQSLPG RFCEAPTMAR KRDLPWQNPN FLQQQQQQQQ QQQYQQRFQN  60
PKGNWNPNGW DWDRVMFIAK PSEAEVMQMG PAAAAVVEHE QKNKVGETLN PLVMKKSAVD  120
EDGENLTLKL GGNLYSTEEN TPRPNKRVRS GSPGGGGGSY PMCQVDDCKG DLSNAKDYHR  180
RHKVCEVHSK TTKALVGKQM QRFCQQCSRF HPLSEFDEGK RSCRRRLAGH NRRRRKTQPE  240
DVSSRLVLPG NQDNPSNGNL DVVNLLAALA RLQGNNVEKA IPDKDRLIQI LSKIASPPVA  300
SNSASRSPVP GGFDLNVSQE VSSEHQNKMN GIASGPSTMD LLAVLSTLAG SSPDALAFLS  360
QRSSLSSDDK TKLNCLDKAA GFNLQKKPVP GFSSVGGERS STSYQSPVEV SDGHVQVARP  420
NLPLQLFSSS PDDDSPPKMG SAWKYFSSDS SNPMESPSSS PPVVQKLFPM QTASEIMKRE  480
RMSISGEDNG TVEVSTTRGW NSPLELFKGP NGRVENSSVQ NLPYQGGYAS SSGSDHSPSS  540
SNSDAQNRTG RIIFKLFDKD PSNFPGTLRT QILEWLSHSP SEMEGYIRPG CVVLSIYISM  600
PSTAWEQLQE DLFQRVNFLV QDLDPDFWRN GRFLVHTDRQ LASYKDGKVR LCKSWRTWSA  660
PEIMFVSPLA VVCGQETSLS LRGRNLSVPG TKIHCTYMGG YLSKEVLGSV GTVYDDTSTE  720
SFKFPGGFPK ILGRCFIEVE NGFKGNSFPV IIADAAICQE LKLLESEFKE DARVGDIISE  780
DQMQDLERPR SREDCLYFLN ELGWLFQRKN TPYSDCPDFS HTRFKFLFTF SVERDWCTLI  840
KTLLDILVER NMGKDGLLRD SLEMLSEIHL LNRAVKRKCR KMVDLLIHYS VSSSTDASKK  900
YLFPPNQTGP GGVTPLHLAA CTHDSKEMVD ALTNDPQEIG LNCWNSLLDT SGQSPYAYAS  960
ARNNHYYNRL VAQKLTDRKH GQVSISVMEG TSLDQSWIVA EESEKANPQR PKSQKPCGKC  1020
AIAATRYYKR MPGYQGLLHR PYVHSMLAIA AVCVCVCLFL RGSPDIGSVA PFKWENLHFG  1080
TS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20980.1	0.0	SBP family protein