PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA00945.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 143aa MW: 16437.6 Da PI: 9.5709 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 131.7 | 1.6e-40 | 2 | 143 | 109 | 253 |
GAGA_bind 109 dslqqlse.pqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesad..erskaekksidlvlngvslD 204 ++ q++++ p++++ ++ re++++ea pi+ +++ k+ +r +++ke+ka + +k+ ++ +kv k +++ +r +++ dl+ln+v +D OVA00945.1 2 HHQQHMHHsPHMAEAYYNSREMHTNEAIPISVVSSVSP---KP---RRDRQTKEHKAISSNKRALNPSRKVGKRGCNdlNRCSDPWRGHDLGLNHVYFD 94 444444444********************987443333...22...34566777777777777778888888888776788999*************** PP GAGA_bind 205 estlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrga 253 +s++ v vC+CtG+l+qCYkWG GWqSaCCt t+S+yPL v++++r++ OVA00945.1 95 DSNMSVHVCTCTGVLQQCYKWGKWGWQSACCTSTLSMYPLLVVPNKRHS 143 ***********************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 143 aa Download sequence |
MHHQQHMHHS PHMAEAYYNS REMHTNEAIP ISVVSSVSPK PRRDRQTKEH KAISSNKRAL 60 NPSRKVGKRG CNDLNRCSDP WRGHDLGLNH VYFDDSNMSV HVCTCTGVLQ QCYKWGKWGW 120 QSACCTSTLS MYPLLVVPNK RHS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G42520.3 | 2e-32 | BBR-BPC family protein |