PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA00622.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family Nin-like
Protein Properties Length: 321aa    MW: 36792.8 Da    PI: 10.367
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA00622.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK84.31.1e-26199248352
      RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                 ++i+l dl+kyF+lpi++A+++L+v+lTvLKr+CR++GI+RWPhRkiksl
  OVA00622.1 199 ARIDLADLAKYFDLPIAEASRNLKVGLTVLKRKCRELGIPRWPHRKIKSL 248
                 789*********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MESSKSPLLS ALAVFRNVLN EELIRSVHVY QFEDGKEKGV EREFMFSPGS YVEVVVSHPL  60
LKLSRIELSK LFEGQVIGLW FCILAFDANN PSVSLSIPSI LVISRNPKLR AIPALADDLE  120
KVFHLSCRTE NKETSQFGTK GMAEESHSIR VLPMFSQDLN CLPYPNAAPR LLENLQQNGA  180
VVSDTVVKKK KRAATEHIAR IDLADLAKYF DLPIAEASRN LKVGLTVLKR KCRELGIPRW  240
PHRKIKSLDT LIHNLQEEAK RQERENKAAA AMAVIKRQRM LEREKEGIER KPFMEIQTET  300
KRFRQDVFKR RHRARVVNRK C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35590.11e-76Nin-like family protein