PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA00360.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | C3H | ||||||||
Protein Properties | Length: 278aa MW: 31357.8 Da PI: 7.8178 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 29.4 | 1.4e-09 | 34 | 54 | 5 | 26 |
--SGGGGTS--TTTTT-SS-SS CS zf-CCCH 5 lCrffartGtCkyGdrCkFaHg 26 C++f+r G C++Gd+C FaHg OVA00360.1 34 ACSDFRR-GNCPRGDSCEFAHG 54 6******.*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 278 aa Download sequence |
MRSRSHDWTD CPFAHPGEKA RRRDPRRFHY SGNACSDFRR GNCPRGDSCE FAHGVFECWL 60 HPARYRTQVC KDGKNCKRKV CFFAHTPKQL RILPQSQSPQ SPDHHPLTDH QFSLSKTKTH 120 NCCCVYCHSS SSVSSSPTST LMGFSHLSSN SPPLSPTTTI INSPSSTSEL SNKQQQSLLG 180 MLSYKNKLME LVSSLEAMDL NEVNSPTNTS VNDQSNYFTW GSCVSSPNYE HPQQFILSPD 240 STRQATRSSK DFFSEDYELN NINGGSCPDL EWVNELVM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G03790.1 | 4e-63 | C3H family protein |