PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA00296.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

bHLH

Protein Properties

Length: 419aa MW: 45481.5 Da PI: 6.0042

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA00296.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31.9	2.3e-10	260	308	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq OVA00296.1 260 NSHSLAERVRREKISERMKLLQDLVPGC----NKITGKAVMLDEIINYVQSLQ 308 58************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 419 aa Download sequence
MGSDDNCDLG IQQRGGSLLN CPSSGIYTTP QPEKVVETTM NSMSLCESSN GVDSFFSTGW 60 DPILSLAQSS SMASQHHQIA SSPYGVFGNQ GISSSSHLVQ YPSDPRLVGL APKFPCFGSG 120 NFSEMVGSLN LPERGQIANA GCPSNYTSNK EGATENNSRN SSPDGKKRKR VPEYNSGKPH 180 HGQFSSVQND AETEQQNDVS DGTLDGRNEQ NENKSKTEKN PAANLRGNST GKQPKDSSQN 240 GQAPKEDYIH VRARRGQATN SHSLAERVRR EKISERMKLL QDLVPGCNKI TGKAVMLDEI 300 INYVQSLQQQ VEFLSMKLAT VNPELNFDID QILSKDILHS RGLGSALLGF GPGVTSSLPP 360 HINPQGTMQA IQCTDSQLPN MSQMPSTWDD ELQTMIQMGF IPNPALDNLG LNGHMKLEL

Sequence ? help Back to Top

Protein Sequence Length: 419 aa Download sequence

MGSDDNCDLG IQQRGGSLLN CPSSGIYTTP QPEKVVETTM NSMSLCESSN GVDSFFSTGW  60
DPILSLAQSS SMASQHHQIA SSPYGVFGNQ GISSSSHLVQ YPSDPRLVGL APKFPCFGSG  120
NFSEMVGSLN LPERGQIANA GCPSNYTSNK EGATENNSRN SSPDGKKRKR VPEYNSGKPH  180
HGQFSSVQND AETEQQNDVS DGTLDGRNEQ NENKSKTEKN PAANLRGNST GKQPKDSSQN  240
GQAPKEDYIH VRARRGQATN SHSLAERVRR EKISERMKLL QDLVPGCNKI TGKAVMLDEI  300
INYVQSLQQQ VEFLSMKLAT VNPELNFDID QILSKDILHS RGLGSALLGF GPGVTSSLPP  360
HINPQGTMQA IQCTDSQLPN MSQMPSTWDD ELQTMIQMGF IPNPALDNLG LNGHMKLEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10120.1	4e-70	bHLH family protein