PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA00161.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family M-type_MADS
Protein Properties Length: 65aa    MW: 7437.65 Da    PI: 10.4579
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA00161.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF103.29.4e-33959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                krienk+nrqvtfskRrng+lKKA+ELSvLCdaev +iifss+gklye++s
  OVA00161.1  9 KRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVGLIIFSSRGKLYEFAS 59
                79***********************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 65 aa     Download sequence    
MGRGRVELKR IENKINRQVT FSKRRNGLLK KAYELSVLCD AEVGLIIFSS RGKLYEFASA  60
GYEIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45650.11e-36MIKC_MADS family protein