PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA00155.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 71aa MW: 8193.4 Da PI: 9.4252 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 97.4 | 6.1e-31 | 14 | 63 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ien ++rqvtfskRrng+lKKA+ELSvLCdaeva+i+fs++ klye+ss OVA00155.1 14 MIENATRRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPREKLYEFSS 63 69**********************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 71 aa Download sequence |
MINNSNGEQS QMRMIENATR RQVTFSKRRN GLLKKAFELS VLCDAEVALI VFSPREKLYE 60 FSSSRIDFTS C |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G22950.1 | 2e-30 | MIKC_MADS family protein |