PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA00143.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 390aa MW: 43514.2 Da PI: 6.8569

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA00143.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.5	2.3e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd +l+ ++++G+g +W + ++++g++R++k+c++rw++yl OVA00143.1 14 RGPWSPEEDAKLKAFIEEHGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 89*********************************************97 PP
2	Myb_DNA-binding	38.4	2.8e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ ++ G++ W+ Ia+ ++ gRt++++k++w++ OVA00143.1 69 GGFSEEEDNIICNLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MGRAPCCDKA NVKRGPWSPE EDAKLKAFIE EHGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDNIIC NLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK 120 QRKEQQSRRS SVNNSLKQAE IKKGMISGTN FMSTTADHNG TQNLYFPALP TVASAPFPAA 180 QEGPNSLNDH TSIRKLLIKL GGRFSDVHHH HHHHLQPAND DMNDLASTDH INVSSTQQEV 240 YENSMDCWFS NSSGSMNYSI INNNPSFELL NNNQNQYDDV DGTSSMQMFQ GLKYCCYPVD 300 HHQLDHNDQN NMDVCSNQQR LVDHEGSSSA ELFYGSAVAM GNESSTTGTT ISSSGESSST 360 WVDMSSFVYP PTVTTFAFDE PPSCSRHLGS

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MGRAPCCDKA NVKRGPWSPE EDAKLKAFIE EHGTGGNWIA LPQKIGLKRC GKSCRLRWLN  60
YLRPNIKHGG FSEEEDNIIC NLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK  120
QRKEQQSRRS SVNNSLKQAE IKKGMISGTN FMSTTADHNG TQNLYFPALP TVASAPFPAA  180
QEGPNSLNDH TSIRKLLIKL GGRFSDVHHH HHHHLQPAND DMNDLASTDH INVSSTQQEV  240
YENSMDCWFS NSSGSMNYSI INNNPSFELL NNNQNQYDDV DGTSSMQMFQ GLKYCCYPVD  300
HHQLDHNDQN NMDVCSNQQR LVDHEGSSSA ELFYGSAVAM GNESSTTGTT ISSSGESSST  360
WVDMSSFVYP PTVTTFAFDE PPSCSRHLGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65790.1	3e-76	MYB family protein