PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA00099.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

bHLH

Protein Properties

Length: 455aa MW: 51343.5 Da PI: 5.2257

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA00099.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.8	3.3e-12	249	300	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ + Lr+l+P + + ++ + a+i A+e++++L+ OVA00099.1 249 QRMTHIAVERNRRKQMNEHLRVLRSLMPGS---YVQRGDQASIIGGAIEFVRELE 300 79**************************...9***************9995 PP

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence
MAVNNYMGMD YSLDHHQQQQ QQQNQHHLMK HTVRVVGENS GENNEGTMVD YMFNNNTPQP 60 QQISSGFCSS TSLDRLSFAE VMQFADFGPK LALNQQSAAS SGKNIISDEE DTTGIIDPVY 120 FLKFPVLSDR FQQDDDQNNL LLAPPPQIPT GNDNHEVDDR FNIGDQITTL ERNKVIEDNH 180 EEGEEEEEAR VISENTTTSL NNRLRFLGGN NLHHQKMINM NPSSEVVITK NSRRKRPRSV 240 KTSEEVESQR MTHIAVERNR RKQMNEHLRV LRSLMPGSYV QRGDQASIIG GAIEFVRELE 300 QLLQCLESQK RRRLFGGSST DSSSSLAPAQ PPFFPSPNLP LPNDQIKLVD IEQAAGLREE 360 TAENKSCLAD VEVKLLGMDA MIKILSRRRP GQLLKTIAAL EDLQLNILHT NITTIEQTVL 420 YSFNVKVAIE TRFTAEDIAS SVQQIFNFIH ASSTI

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence

MAVNNYMGMD YSLDHHQQQQ QQQNQHHLMK HTVRVVGENS GENNEGTMVD YMFNNNTPQP  60
QQISSGFCSS TSLDRLSFAE VMQFADFGPK LALNQQSAAS SGKNIISDEE DTTGIIDPVY  120
FLKFPVLSDR FQQDDDQNNL LLAPPPQIPT GNDNHEVDDR FNIGDQITTL ERNKVIEDNH  180
EEGEEEEEAR VISENTTTSL NNRLRFLGGN NLHHQKMINM NPSSEVVITK NSRRKRPRSV  240
KTSEEVESQR MTHIAVERNR RKQMNEHLRV LRSLMPGSYV QRGDQASIIG GAIEFVRELE  300
QLLQCLESQK RRRLFGGSST DSSSSLAPAQ PPFFPSPNLP LPNDQIKLVD IEQAAGLREE  360
TAENKSCLAD VEVKLLGMDA MIKILSRRRP GQLLKTIAAL EDLQLNILHT NITTIEQTVL  420
YSFNVKVAIE TRFTAEDIAS SVQQIFNFIH ASSTI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	250	261	RMTHIAVERNRR
2	310	314	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24140.1	1e-119	bHLH family protein