PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OUZ99973.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 1076aa MW: 118356 Da PI: 4.816

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OUZ99973.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.6	2.5e-17	46	92	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd +l +av+++ g++Wk+Ia+++ Rt+ qc +rwqk+l OUZ99973.1 46 KGQWTAEEDAILCRAVQRFKGRNWKKIAECFK-DRTDVQCLHRWQKVL 92 799**************************9.**********986 PP
2	Myb_DNA-binding	63.4	4.3e-20	98	144	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde++v++v+++G + W+tIa+ ++ gR +kqc++rw+++l OUZ99973.1 98 KGPWSKEEDEIIVELVNKHGAKKWSTIAQALP-GRIGKQCRERWHNHL 144 79****************************.***********97 PP
3	Myb_DNA-binding	48.4	2.2e-15	150	192	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +WT+eE++ l++a++ +G++ W+ + ++ gRt++++k++w+ OUZ99973.1 150 KEAWTQEEELALIHAHQIYGNK-WAELTKFLP-GRTDNMIKNHWN 192 579*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 1076 aa Download sequence
MESDRSQGAR GAEIPVKAPP DEGSDGFQRM RPSHGRTSGP TRRSTKGQWT AEEDAILCRA 60 VQRFKGRNWK KIAECFKDRT DVQCLHRWQK VLNPELVKGP WSKEEDEIIV ELVNKHGAKK 120 WSTIAQALPG RIGKQCRERW HNHLNPAINK EAWTQEEELA LIHAHQIYGN KWAELTKFLP 180 GRTDNMIKNH WNSSVKKKLD SYLASGLLAQ FQGLPHVGNS NQCMPSSSRV QQSSRENSCL 240 KDGTEIEEAS ECSQASTAFG CSQTDCNMAN TMPVHAQDEF KMTEEFGQIE LQNSSPSSCS 300 QQYYTSLEEV ACTVPEIPCG TTISVKSPEQ NLLNYPGSSG NKDCHFSSHE LLNNSLQDPS 360 GLFETSTHCI TGGDENLQTG SLMLGSSMEN IMVRADKQEQ ASISQSDCCG VVFSEEGMSG 420 CFSMVNLKKC SNIIDMDGRS DSLICRSESQ SSETGRSFAS HPYYPLRSSD VLATSCCEPL 480 LNSSHPLLCA GEGKLIFGSE CTELRDMSSG TQDSEIFTSS CDGFIYPEGG CSNSPCDDDI 540 EKDCLALKPN WVNDASKPVP VDIFASLNLD SMGTLPSVEV DETTTVKAED QDPGALFYEP 600 PRFPSLELPF FSCDLIQSGG DLQQAYSPLG IRQLMMSSMN CSPYSLFDSP SRDDSPDVVL 660 KSAAKSFQCT PSILKKRQRE LLSPLQERKS EKKFERDISQ GQFCTSKMTS SDFSCLDVVY 720 DENGVGRVSL SAIESALFSP TCYQKKTSGA STCDKENLDH GGNSFSDGRI SEKGMSVDTE 780 NKMKQEATGV AAMTKIDDDD TIEMVQQPSG VLVEHNINDR LFFSPDRNGY PTNRVFSAGA 840 KNTRTQHSRS LETTSSQDVL IGRSESSSVN VFVSPTIDER KHVRPLVPAA SVQCFALSHS 900 HPHEVTFENA GNDGDIESFT ICGGTPAIKR GFESPSAWKS PWFMNSFLPG PRVDTDITIE 960 DIGYFMSPGD RSYDALGLMK QLSEHTAAAL AEAQEVLASD QKVPSKERYC DQENNQLPDS 1020 EMENINPSPP VVLTERRVLD FSECDTPGKG TESKKSVVAT SVSFSSPSSY LMKGCR

Sequence ? help Back to Top

Protein Sequence Length: 1076 aa Download sequence

MESDRSQGAR GAEIPVKAPP DEGSDGFQRM RPSHGRTSGP TRRSTKGQWT AEEDAILCRA  60
VQRFKGRNWK KIAECFKDRT DVQCLHRWQK VLNPELVKGP WSKEEDEIIV ELVNKHGAKK  120
WSTIAQALPG RIGKQCRERW HNHLNPAINK EAWTQEEELA LIHAHQIYGN KWAELTKFLP  180
GRTDNMIKNH WNSSVKKKLD SYLASGLLAQ FQGLPHVGNS NQCMPSSSRV QQSSRENSCL  240
KDGTEIEEAS ECSQASTAFG CSQTDCNMAN TMPVHAQDEF KMTEEFGQIE LQNSSPSSCS  300
QQYYTSLEEV ACTVPEIPCG TTISVKSPEQ NLLNYPGSSG NKDCHFSSHE LLNNSLQDPS  360
GLFETSTHCI TGGDENLQTG SLMLGSSMEN IMVRADKQEQ ASISQSDCCG VVFSEEGMSG  420
CFSMVNLKKC SNIIDMDGRS DSLICRSESQ SSETGRSFAS HPYYPLRSSD VLATSCCEPL  480
LNSSHPLLCA GEGKLIFGSE CTELRDMSSG TQDSEIFTSS CDGFIYPEGG CSNSPCDDDI  540
EKDCLALKPN WVNDASKPVP VDIFASLNLD SMGTLPSVEV DETTTVKAED QDPGALFYEP  600
PRFPSLELPF FSCDLIQSGG DLQQAYSPLG IRQLMMSSMN CSPYSLFDSP SRDDSPDVVL  660
KSAAKSFQCT PSILKKRQRE LLSPLQERKS EKKFERDISQ GQFCTSKMTS SDFSCLDVVY  720
DENGVGRVSL SAIESALFSP TCYQKKTSGA STCDKENLDH GGNSFSDGRI SEKGMSVDTE  780
NKMKQEATGV AAMTKIDDDD TIEMVQQPSG VLVEHNINDR LFFSPDRNGY PTNRVFSAGA  840
KNTRTQHSRS LETTSSQDVL IGRSESSSVN VFVSPTIDER KHVRPLVPAA SVQCFALSHS  900
HPHEVTFENA GNDGDIESFT ICGGTPAIKR GFESPSAWKS PWFMNSFLPG PRVDTDITIE  960
DIGYFMSPGD RSYDALGLMK QLSEHTAAAL AEAQEVLASD QKVPSKERYC DQENNQLPDS  1020
EMENINPSPP VVLTERRVLD FSECDTPGKG TESKKSVVAT SVSFSSPSSY LMKGCR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.2	0.0	MYB family protein