PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OUZ99459.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

Trihelix

Protein Properties

Length: 966aa MW: 108454 Da PI: 6.8371

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OUZ99459.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	28.5	4e-09	195	251	20	76
trihelix 20 rlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsess 76 +++rgk ++ + +ev++++ ++g++r +k+ kw+n+ ++++k+ e+ek++ +++ OUZ99459.1 195 SSGRGKTRAEKDREVAEFLNRHGVNRDAKTSGTKWDNMLGEFRKVYEWEKGNDEREN 251 456889999999**************************************9855444 PP

Sequence ? help Back to Top
Protein Sequence Length: 966 aa Download sequence
MGDKIGGIGE ERIKNQEDPL EESSHEDPQQ QHHSIVVNTA SLISDSLYNI PTLGGSSSAQ 60 FDDHQDDDHT LNPKRPRFGS GQWRKIIPST HQQRHQKMSP TDQTLAIEPH TLQTNTTGSS 120 TPTASSPSPS PSPSQETNKP FQIRKGKFVS PVWKPNEMLW LAKAWRLQYQ VGGGGGDEVV 180 SLSTSSSQSD VVSLSSGRGK TRAEKDREVA EFLNRHGVNR DAKTSGTKWD NMLGEFRKVY 240 EWEKGNDERE NVGKSYFRLS PYERKIHKLP ASFDEEVYNE LSQFMGIRVR VSSQSRVALI 300 SGDDNIGRIT TSPPVTTSLP PLPPPLSHQF KEEDQLSLSA GRARQGMESG AGTEAFGHGG 360 HHGMITEFAG PSSSSASSRE VRRIGRIKMT WEESVNLWAE EGDHHDHQYQ RGRVKLQGLG 420 FLNADELTYL DETMAGCTME CFEDGPLKGF SIDRFVCGQQ VKVFGRRKSS PSSTTSAGCF 480 TDRLQLPVTE PSIRPIPPWE YQDPTDYYIG CLKVPPATLP SLFELSWHLQ EPPSEDLRFP 540 LRKDVYKDLP QGKELFFTTT TELLDSRAIT FDILSPIIRS NPSISSSTAT SRDSFISLWD 600 DCINRVVSKF CSQEMVIVRK PSFTSSISTD NLQDQWPNVT GFVRNLCLWR GEEVDKFREG 660 NLDPSSSLTE KILWTYMDLP YILGYYAIGH SVTFCALSRS QDLVIRTDLY SVDLTTPTDR 720 LKSLVPCWRI AGLLPLLAER CFNNNNNKAF PYSDFERLNL GGGNLIEMTP NTVKRSFSSR 780 RKFIAVKEVY DFLDRRIPHA EYIFRSSEKD LALTFKPRGC KLKPTNCEQL VEALKFVTKA 840 LVALHDLSFM HRDLGWDKVM KRSDRENEWF VGGFEEAVGA PQIYPNGGMV GPRHAPEMGR 900 GLHGVKVDMW GVGQLVKTSG LAVPMLLREL QNRCLDQNPE QRPTAADCYH HLLQLQSSLC 960 VAPGGF

Sequence ? help Back to Top

Protein Sequence Length: 966 aa Download sequence

MGDKIGGIGE ERIKNQEDPL EESSHEDPQQ QHHSIVVNTA SLISDSLYNI PTLGGSSSAQ  60
FDDHQDDDHT LNPKRPRFGS GQWRKIIPST HQQRHQKMSP TDQTLAIEPH TLQTNTTGSS  120
TPTASSPSPS PSPSQETNKP FQIRKGKFVS PVWKPNEMLW LAKAWRLQYQ VGGGGGDEVV  180
SLSTSSSQSD VVSLSSGRGK TRAEKDREVA EFLNRHGVNR DAKTSGTKWD NMLGEFRKVY  240
EWEKGNDERE NVGKSYFRLS PYERKIHKLP ASFDEEVYNE LSQFMGIRVR VSSQSRVALI  300
SGDDNIGRIT TSPPVTTSLP PLPPPLSHQF KEEDQLSLSA GRARQGMESG AGTEAFGHGG  360
HHGMITEFAG PSSSSASSRE VRRIGRIKMT WEESVNLWAE EGDHHDHQYQ RGRVKLQGLG  420
FLNADELTYL DETMAGCTME CFEDGPLKGF SIDRFVCGQQ VKVFGRRKSS PSSTTSAGCF  480
TDRLQLPVTE PSIRPIPPWE YQDPTDYYIG CLKVPPATLP SLFELSWHLQ EPPSEDLRFP  540
LRKDVYKDLP QGKELFFTTT TELLDSRAIT FDILSPIIRS NPSISSSTAT SRDSFISLWD  600
DCINRVVSKF CSQEMVIVRK PSFTSSISTD NLQDQWPNVT GFVRNLCLWR GEEVDKFREG  660
NLDPSSSLTE KILWTYMDLP YILGYYAIGH SVTFCALSRS QDLVIRTDLY SVDLTTPTDR  720
LKSLVPCWRI AGLLPLLAER CFNNNNNKAF PYSDFERLNL GGGNLIEMTP NTVKRSFSSR  780
RKFIAVKEVY DFLDRRIPHA EYIFRSSEKD LALTFKPRGC KLKPTNCEQL VEALKFVTKA  840
LVALHDLSFM HRDLGWDKVM KRSDRENEWF VGGFEEAVGA PQIYPNGGMV GPRHAPEMGR  900
GLHGVKVDMW GVGQLVKTSG LAVPMLLREL QNRCLDQNPE QRPTAADCYH HLLQLQSSLC  960
VAPGGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	4e-08	Trihelix family protein