PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA12G03330.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

TALE

Protein Properties

Length: 652aa MW: 66575.6 Da PI: 6.2339

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA12G03330.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.6	2.5e-09	371	408	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + ONIVA12G03330.1 371 FEHflHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVR 408 554459******************************88 PP
2	BELL	115.1	3.5e-37	218	289	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erqelq+kk+kLl++l+eV++rY+qy+ q+q v+++Fea+ag gsa+ YtslAl++iSr+FrcL+daia q+ ONIVA12G03330.1 218 ERQELQMKKSKLLNMLDEVEQRYRQYHRQMQGVAAAFEAAAGAGSATTYTSLALRTISRQFRCLRDAIAAQV 289 79*******************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 652 aa Download sequence
MAAYFTGGGA GTDVVQAAGT DGLQTLYLMN PSYVGFTDAA AAPGGGAAAA NMVFLNSAVS 60 TLTPASFGHH HQPTPAAQHF VGIPLQSGYN LWGPDATGGN DLSPPRHGAQ QQAPAAAGTS 120 AAAVSPVLSL SSREAAPPVT VAAAAVPGGT DQEKVVMRSR YLKAAQELLD EAVSVSKGAA 180 TAVKKKEDSE GGVSGGGGGA EDGGGSKSGA AAEMSTAERQ ELQMKKSKLL NMLDEVEQRY 240 RQYHRQMQGV AAAFEAAAGA GSATTYTSLA LRTISRQFRC LRDAIAAQVR AASRGLGEDC 300 GDDEGGGGGG GGRTTVGSRL RFIDHQLRQQ RAMQQLGMVH AAAAGGAAGG GWRPQRGLPE 360 RAVSVLRAWL FEHFLHPYPK DSDKVMLAKQ TGLTRSQVSN WFINARVRLW KPMVEEMYAE 420 ETKAKEEEEE EHDAAAAAAG DRGGVAEQAP SKPDDSAGIG MSSSSPAAAA SRSVGVHAGD 480 QHAQASFYGG GGGGDDPFQC RIKKARTTTA DEPAAAAAFH VSGEAAVSHR ELLMKFTEAG 540 GEGVRTGHPH VNDDDDDVPG GAGGYSLFTA AQYGHQFGSD HFAFAGHGGG GGGGVSLTLG 600 LPHGADQTPA SFLIGAGAGS DGGGAPVTTA GYDMNMQSTK SLAAQLMRDF VA

Sequence ? help Back to Top

Protein Sequence Length: 652 aa Download sequence

MAAYFTGGGA GTDVVQAAGT DGLQTLYLMN PSYVGFTDAA AAPGGGAAAA NMVFLNSAVS  60
TLTPASFGHH HQPTPAAQHF VGIPLQSGYN LWGPDATGGN DLSPPRHGAQ QQAPAAAGTS  120
AAAVSPVLSL SSREAAPPVT VAAAAVPGGT DQEKVVMRSR YLKAAQELLD EAVSVSKGAA  180
TAVKKKEDSE GGVSGGGGGA EDGGGSKSGA AAEMSTAERQ ELQMKKSKLL NMLDEVEQRY  240
RQYHRQMQGV AAAFEAAAGA GSATTYTSLA LRTISRQFRC LRDAIAAQVR AASRGLGEDC  300
GDDEGGGGGG GGRTTVGSRL RFIDHQLRQQ RAMQQLGMVH AAAAGGAAGG GWRPQRGLPE  360
RAVSVLRAWL FEHFLHPYPK DSDKVMLAKQ TGLTRSQVSN WFINARVRLW KPMVEEMYAE  420
ETKAKEEEEE EHDAAAAAAG DRGGVAEQAP SKPDDSAGIG MSSSSPAAAA SRSVGVHAGD  480
QHAQASFYGG GGGGDDPFQC RIKKARTTTA DEPAAAAAFH VSGEAAVSHR ELLMKFTEAG  540
GEGVRTGHPH VNDDDDDVPG GAGGYSLFTA AQYGHQFGSD HFAFAGHGGG GGGGVSLTLG  600
LPHGADQTPA SFLIGAGAGS DGGGAPVTTA GYDMNMQSTK SLAAQLMRDF VA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	3e-80	TALE family protein

Link Out ? help Back to Top
Ensembl	ONIVA12G03330.1