PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA12G01890.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family GRAS
Protein Properties Length: 976aa    MW: 108830 Da    PI: 7.1945
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA12G01890.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS39.21e-12201262110
             GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal.ppsetseknsseelaalklfsevsPilkfs 94 
                      v lL ecA +v++g++e+a+   ++++ l   ++ p+q l + ++  L +rl++s ++ly al +ps+    + s+  aa++ f+++ P+l  +
  ONIVA12G01890.1  20 VPLLHECASHVTEGSFEKADFSFKKIRMLT-IADGPLQHLSKIIVDSLDHRLLSSIQGLYGALiNPSDYF--EKSTLRAARHNFFKLNPYLSTG 110
                      6789**********************9876.5667*************************9995555554..35555567788*********** PP

             GRAS  95 hltaNqaIleavegee 110
                      ++t N+aI+ea+e e+
  ONIVA12G01890.1 111 FVTINRAIMEAMEDEK 126
                      *************986 PP
2GRAS206.71.3e-63168475109371
             GRAS 109 eervHiiDfdis..qGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp.. 198
                       + vHi+D++ s  ++ QW+ Ll+ +  Rp+g+p+l +T++++    +++ l e+++ L+k Ae+l+v+f+f   v  rle+l++++Lr     
  ONIVA12G01890.1 168 LQVVHIVDLSCSaaHPWQWLKLLDDFHGRPGGAPELYLTVLHD----DNDFLAEMQSLLSKKAESLEVSFRFIS-VIGRLETLDFSNLRSTFqi 256
                      4789*****8653389***************************....9**************************.799**********544445 PP

             GRAS 199 ..gEalaVnlvlqlhrll.........................................desvsleserdevLklvkslsPkvvvvveqeadhn 249
                        g a+a++++lq+hrll                                           s  +++   ++L++++ l+P+++v +eq+adhn
  ONIVA12G01890.1 257 kfGVAVAISCALQMHRLLlvddnlsstsiaqlqkmanftqpkqmassvcspastlnylqTPSPRTPKLLARLLSAIRALKPNIMVNMEQDADHN 350
                      55*******************************************************98666777778899*********************** PP

             GRAS 250 sesFlerflealeyysalfdsleaklpres...eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqakll 340
                      +  F +rf e l+yy+alfd+++a ++++    +er  vEr++l++ei+n++ ceg +r erhe+l +W + +ee+GF++v+ls +a  + k  
  ONIVA12G01890.1 351 ALLFRDRFNEVLNYYAALFDCFHAVAAANPgrtDERLRVERMILREEIKNILVCEGVHRHERHERLDQWAMHMEESGFHNVQLSFSAIREGKEN 444
                      **********************77654444456************************************************************* PP

             GRAS 341 lrkvksdgyrveeesgslvlgWkdrpLvsvS 371
                      l  ++ +  + +e++g+++l+W + +L+s+S
  ONIVA12G01890.1 445 LLSFGLKNCQNKEDRGCFLLCWGSTNLYSIS 475
                      *****888*********************99 PP
3GRAS356.73.5e-1095289652374
             GRAS   2 velLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                      + lL++cA  vs+g++ +a+ +L+++ +las d+  ++qRlaa+f+ ALa++l++  ++l++al +s++s +    +  a++  ++v P+lk++
  ONIVA12G01890.1 528 IGLLYQCAAEVSAGSFDRANLCLEHITQLASLDApHALQRLAAVFADALARKLLNLIPGLSRALLSSANSADA-HLVPVARRHMFDVLPFLKLA 620
                      679*******************************9*****************************888887544.44446778899********* PP

             GRAS  95 hltaNqaIleavegeervHiiDfd..isqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrl 186
                      +lt+N+aIlea+ege+ vH++Df+  + +++QW+aL++a+  R+egpp+lRiT+v++    ske l +++  L+k Ae++++ f+fn+ v+ +l
  ONIVA12G01890.1 621 YLTTNHAILEAMEGERFVHVVDFSgpAANPVQWIALFHAFRGRREGPPHLRITAVHD----SKEFLANMAAVLSKEAEAFDIAFQFNA-VEAKL 709
                      ***********************966899****************************....9**************************.7999* PP

             GRAS 187 edleleeL....rvkpgEalaVnlvlqlhrll.............................................................. 214
                      +++++++L     v++gEalaV++vlqlhrll                                                              
  ONIVA12G01890.1 710 DEMDFDALrhdlGVRSGEALAVSVVLQLHRLLavddgrrhaatgcltpvqiiarssprsfgellerelntrlqlspdasvvsslsshspaaata 803
                      *999998843335667****************************************************************************98 PP

             GRAS 215 desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrer 308
                      +++++++ +  ++L++v+slsPk++v++eqea+hn++ F erf eal+yy++lfd+l+ + ++++ er+ vEr+llg+ei+ vvacegaer+er
  ONIVA12G01890.1 804 AHPTTSTPKLGSFLSAVRSLSPKIMVMTEQEANHNGGAFQERFDEALNYYASLFDCLQRS-AAAAAERARVERVLLGEEIRGVVACEGAERVER 896
                      555555556999*********************************************999.68889**************************** PP

             GRAS 309 hetlekWrerleeaGFkpvplsekaakqaklllrkvksdg.yrveee..sgslvlgWkdrpLvsvSaWr 374
                      he++++W +r+e+aG++ v ls++ a++a+ ll+ +++ g y+v ++  s+ ++++W++rpL++v+aWr
  ONIVA12G01890.1 897 HERARQWAARMEAAGMERVGLSYSGAMEARKLLQSCGWAGpYEVRHDagSHGFFFCWHKRPLYAVTAWR 965
                      *************************************8888****885566789**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 976 aa     Download sequence    
MMHGLWVQDQ GMVDHLAQLV PLLHECASHV TEGSFEKADF SFKKIRMLTI ADGPLQHLSK  60
IIVDSLDHRL LSSIQGLYGA LINPSDYFEK STLRAARHNF FKLNPYLSTG FVTINRAIME  120
AMEDEKNFLE IKVKSNLCSI LKLSHYNFKT LQGAIYVERS LMFNMVELQV VHIVDLSCSA  180
AHPWQWLKLL DDFHGRPGGA PELYLTVLHD DNDFLAEMQS LLSKKAESLE VSFRFISVIG  240
RLETLDFSNL RSTFQIKFGV AVAISCALQM HRLLLVDDNL SSTSIAQLQK MANFTQPKQM  300
ASSVCSPAST LNYLQTPSPR TPKLLARLLS AIRALKPNIM VNMEQDADHN ALLFRDRFNE  360
VLNYYAALFD CFHAVAAANP GRTDERLRVE RMILREEIKN ILVCEGVHRH ERHERLDQWA  420
MHMEESGFHN VQLSFSAIRE GKENLLSFGL KNCQNKEDRG CFLLCWGSTN LYSISLRLCC  480
TDRGMFQDDM LSSATSSPAS SVYSPSPSPS NGSWVQELSH DQQSVRLIGL LYQCAAEVSA  540
GSFDRANLCL EHITQLASLD APHALQRLAA VFADALARKL LNLIPGLSRA LLSSANSADA  600
HLVPVARRHM FDVLPFLKLA YLTTNHAILE AMEGERFVHV VDFSGPAANP VQWIALFHAF  660
RGRREGPPHL RITAVHDSKE FLANMAAVLS KEAEAFDIAF QFNAVEAKLD EMDFDALRHD  720
LGVRSGEALA VSVVLQLHRL LAVDDGRRHA ATGCLTPVQI IARSSPRSFG ELLERELNTR  780
LQLSPDASVV SSLSSHSPAA ATAAHPTTST PKLGSFLSAV RSLSPKIMVM TEQEANHNGG  840
AFQERFDEAL NYYASLFDCL QRSAAAAAER ARVERVLLGE EIRGVVACEG AERVERHERA  900
RQWAARMEAA GMERVGLSYS GAMEARKLLQ SCGWAGPYEV RHDAGSHGFF FCWHKRPLYA  960
VTAWRPAASR RGHTRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.12e-98GRAS family protein