PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA11G04380.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family C2H2
Protein Properties Length: 410aa    MW: 43083.2 Da    PI: 9.0391
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA11G04380.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H220.51.2e-06193216123
                      EEETTTTEEESSHHHHHHHHHH.T CS
          zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                      ++CpdC+++F  +++L+ H +t H
  ONIVA11G04380.1 193 FSCPDCDEVFVKPDSLELHRSTrH 216
                      89******************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    
MEASAAKEKD KGGKKMSRVG SWGSMAFYSS SSSSRSQPVS AAEGKNGGKK EKRRSSISRS  60
ITCAGSICST KESSVSSRGR GRRRRSGGGG GGDGGGGGST SSRSLMGPGY HGDSAAAVSA  120
SSSFNSVMTA ATFATATTTT TTTSSSATSP PSALSSPLSS IGGSFRAMQI RKLSGCYLHC  180
HSVLDPRTLA AVFSCPDCDE VFVKPDSLEL HRSTRHAELG ADDTSRNIVE IIFQSSWLKK  240
NAPVCRIERI LKVQSSDKTI KRFEQHKEAV KEKARSAGDE AGRNPRCVAD GNELLRFHCT  300
TFACSLGLAG GTALCCASSV DGNGRITTMA TSGRAHDTAE VSPDGEKRAM LVCRVVAGRV  360
KKLHSSNSSE DHDCDSVSPC SEGVYSDLDE LFVFSPRAIL PCFIVIYSGY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.13e-74C2H2 family protein