PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Link Out |

Basic Information? help Back to Top

TF ID

ONIVA10G18590.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

TALE

Protein Properties

Length: 602aa MW: 64678.4 Da PI: 7.2148

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA10G18590.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	24.5	4.6e-08	365	396	23	54
SS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 23 rypsaeereeLAkklgLterqVkvWFqNrRak 54 ryps ++ LA+++gL+ +qV +WF N R + ONIVA10G18590.1 365 RYPSDVDKHILARQTGLSRSQVANWFINARVR 396 8*****************************88 PP
2	BELL	93.7	1.7e-30	207	277	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +elq+ k kL ++leeVd+rY++y+eq++++++sFeavag +a+ Yt+lA+++iSrhFr+L+d ++ q+ ONIVA10G18590.1 207 AAELQRLKGKLYTMLEEVDRRYRRYCEQMRALAASFEAVAGERAAAAYTRLASRTISRHFRSLRDGVVAQL 277 5799****************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 602 aa Download sequence
MAHDPSLGYA DYFAAEVDGA GATELYGLQQ HQQGVGVAEM FGVRGLMPAA HAHEQSKGVG 60 ALVVGGGGVD DGGATTLPTV HFGGLGELHH HQHRQSQAPL SLSLHRPEAA ATSLLMQQQQ 120 QHLHHQPSPP AGAASTWQLQ QGAWHLRGSR FLLPTQQLLQ EFCSLPVKST TSPSSASKAT 180 KPPQEEAASG GGSSSWTAPT QIQSMDAAEL QRLKGKLYTM LEEVDRRYRR YCEQMRALAA 240 SFEAVAGERA AAAYTRLASR TISRHFRSLR DGVVAQLQAV RKQLGEKDTA VPGMTKGETP 300 RLRVLDQCLR QHKAYQAGML ESHPWRPQRG LPERAVSILR AWLFEHFLHP RMFAGFVTML 360 KLSPRYPSDV DKHILARQTG LSRSQVANWF INARVRLWKP MVEEMYAEEM KDEEGSGQST 420 QASNPQNPNP SSYTSEVRGG GGGGVEDRGE QKPSRAQLLH DAGSLASVVS IGHGGAGRTM 480 VDHHHHQSLN FGMMDQLDFD AYEAAGGGQG FGAGGGVSLT LGLQQQHADP HDGVNVAFAA 540 AAAPPNSSGV AAEYLFMGGG EHQQQLPQTA QFGAVMEGDA ASHYRGLSAT AAGFHLLHDL 600 AG

Sequence ? help Back to Top

Protein Sequence Length: 602 aa Download sequence

MAHDPSLGYA DYFAAEVDGA GATELYGLQQ HQQGVGVAEM FGVRGLMPAA HAHEQSKGVG  60
ALVVGGGGVD DGGATTLPTV HFGGLGELHH HQHRQSQAPL SLSLHRPEAA ATSLLMQQQQ  120
QHLHHQPSPP AGAASTWQLQ QGAWHLRGSR FLLPTQQLLQ EFCSLPVKST TSPSSASKAT  180
KPPQEEAASG GGSSSWTAPT QIQSMDAAEL QRLKGKLYTM LEEVDRRYRR YCEQMRALAA  240
SFEAVAGERA AAAYTRLASR TISRHFRSLR DGVVAQLQAV RKQLGEKDTA VPGMTKGETP  300
RLRVLDQCLR QHKAYQAGML ESHPWRPQRG LPERAVSILR AWLFEHFLHP RMFAGFVTML  360
KLSPRYPSDV DKHILARQTG LSRSQVANWF INARVRLWKP MVEEMYAEEM KDEEGSGQST  420
QASNPQNPNP SSYTSEVRGG GGGGVEDRGE QKPSRAQLLH DAGSLASVVS IGHGGAGRTM  480
VDHHHHQSLN FGMMDQLDFD AYEAAGGGQG FGAGGGVSLT LGLQQQHADP HDGVNVAFAA  540
AAAPPNSSGV AAEYLFMGGG EHQQQLPQTA QFGAVMEGDA ASHYRGLSAT AAGFHLLHDL  600
AG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36870.2	7e-70	TALE family protein

Link Out ? help Back to Top
Ensembl	ONIVA10G18590.1