PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA10G14800.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family HD-ZIP
Protein Properties Length: 855aa    MW: 93866.2 Da    PI: 5.488
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA10G14800.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.71.9e-182987357
                     --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
         Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                     k  ++t+eq+e+Le++++++++ps ++r++L + +    +++ +q+kvWFqNrR ++k+
  ONIVA10G14800.1 29 KYVRYTPEQVEALERVYAECPKPSSSRRQQLLRDCpilaNIEPKQIKVWFQNRRCRDKQ 87
                     5678****************************************************996 PP
2START149.23.7e-471673892204
                      HHHHHHHHHHHHHHHC-TT-EEEE...............EXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEE CS
            START   2 laeeaaqelvkkalaeepgWvkss...............esengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakae 80 
                      +aee+++e+++ka+ ++  Wv ++               ++++g+++  +++ s++++g a+ra+g+v  ++++ ve+l d++  W +++++ e
  ONIVA10G14800.1 167 IAEETLTEFLSKATGTAVDWVPMPgmkvdcqllrftlpaSNDPGPDSFGIVAVSHGCRGVAARACGLVNLEPTKIVEILKDRP-SWFRDCRSLE 259
                      7899*********************************************************************9999999999.********** PP

                      EEEEECTT..EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE CS
            START  81 tlevissg..galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwve 168
                      +      g  g+++l +++++a+++lvp Rdf+++Ry+ ++++g++v++++S++     p+    +++vRae+lpSg+l++p+++g+s v++v+
  ONIVA10G14800.1 260 VFTMFPAGngGTIELVYMQMYAPTTLVPaRDFWTLRYTTTMEDGSLVVCERSLSGSGGGPStasAQQFVRAEMLPSGYLVRPCEGGGSIVHIVD 353
                      *999999999********************************************9999998888899*************************** PP

                      -EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXX CS
            START 169 hvdlkgrlphwllrslvksglaegaktwvatlqrqc 204
                      h dl++++++++lr+l++s+++ ++k+++a+l++ +
  ONIVA10G14800.1 354 HLDLEAWSVPEVLRPLYESSRVVAQKMTTAALRHIR 389
                      ********************************9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 855 aa     Download sequence    
MAAAVAMRSG SGSDGGGGGY DKAGMDSGKY VRYTPEQVEA LERVYAECPK PSSSRRQQLL  60
RDCPILANIE PKQIKVWFQN RRCRDKQRKE ASRLQAVNRK LTAMNKLLME ENERLQKQVS  120
QLVHENAYMK QQLQNPSLGN DTSCESNVTT PQNPLRDASN PSGLLTIAEE TLTEFLSKAT  180
GTAVDWVPMP GMKVDCQLLR FTLPASNDPG PDSFGIVAVS HGCRGVAARA CGLVNLEPTK  240
IVEILKDRPS WFRDCRSLEV FTMFPAGNGG TIELVYMQMY APTTLVPARD FWTLRYTTTM  300
EDGSLVVCER SLSGSGGGPS TASAQQFVRA EMLPSGYLVR PCEGGGSIVH IVDHLDLEAW  360
SVPEVLRPLY ESSRVVAQKM TTAALRHIRQ IAQETSGEVV YALGRQPAVL RTFSQRLSRG  420
FNDAISGFND DGWSVMGGDG IEDVIIACNA KKVRNTSTSA NAFVTPGGVI CAKASMLLQS  480
VPPAVLVRFL REHRSEWADY NFDAYSASSL KTSSCSLPGL RPMRFSGSQI IMPLAHTVEN  540
EEILEVVRLE GQALTHDDGL MSRDIHLLQL CTGIDEKSMG SCFQLVFAPI DELFPDDAPL  600
ISSGFRVIPL DMKTDGTPAG RTLDLASSLE VGSTAQPTGD ASMDDCNLRS VLTIAFQFPY  660
EMHLQDSVAT MARQYVRSIV SSVQRVSMAI SPSRSGLNAG QKIISGFPEA PTLARWICQS  720
YQFHLGVELL RQADDAGEAL LKMLWDYEDA ILCCSFKEKP VFTFANEMGL NMLETSLVAL  780
QDLSLDKIFD EAGRKALYNE IPKLMEQGYV YLPGGVCLSG MGRHVSFEQA VAWKVLGEDN  840
NVHCLAFCFV NWSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60690.10.0HD-ZIP family protein