PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

ONIVA10G10210.2

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

TALE

Protein Properties

Length: 350aa MW: 37324.6 Da PI: 5.3984

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA10G10210.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.8	7.8e-08	292	325	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL+ +q+ +WF N+R + ONIVA10G10210.2 292 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 325 569*****************************87 PP
2	ELK	26.6	1.3e-09	246	267	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++L+++++E++ ONIVA10G10210.2 246 ELKHELKQGYKEKLIDIREEIL 267 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MAFHGHLPHE MTMQALGADD AAVAAAAAAG GTTSDSSASP SGAAAAAAAA AAAGVQQWMG 60 GGGGGEDAVA AAMGGGGEAD AARCKAEILA HPLYEQLLSA HVACLRIATP VDQLPRIDAQ 120 LAQSQGVVAK YSALAAAAAG DDGRELDQFM THYVLLLCSF KEQLQQHVRV HAMEAVMACW 180 ELEQNLQSLT GASPGEGTGA TMSDGEDDQA DSEANMYDPS LDGADNMGFG LPTESERSLM 240 ERVRQELKHE LKQGYKEKLI DIREEILRKR RAGKLPGDTT STLKAWWQSH AKWPYPTEED 300 KARLVQETGL QLKQINNWFI NQRKRNWHSN PSSSTSVKTK RKSNAGDNNS

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MAFHGHLPHE MTMQALGADD AAVAAAAAAG GTTSDSSASP SGAAAAAAAA AAAGVQQWMG  60
GGGGGEDAVA AAMGGGGEAD AARCKAEILA HPLYEQLLSA HVACLRIATP VDQLPRIDAQ  120
LAQSQGVVAK YSALAAAAAG DDGRELDQFM THYVLLLCSF KEQLQQHVRV HAMEAVMACW  180
ELEQNLQSLT GASPGEGTGA TMSDGEDDQA DSEANMYDPS LDGADNMGFG LPTESERSLM  240
ERVRQELKHE LKQGYKEKLI DIREEILRKR RAGKLPGDTT STLKAWWQSH AKWPYPTEED  300
KARLVQETGL QLKQINNWFI NQRKRNWHSN PSSSTSVKTK RKSNAGDNNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.1	1e-157	TALE family protein

Link Out ? help Back to Top
Ensembl	ONIVA10G10210.2