PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

ONIVA10G07200.4

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

CAMTA

Protein Properties

Length: 1836aa MW: 207968 Da PI: 8.6439

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA10G07200.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	93.2	2.3e-29	831	904	42	117
CG-1 42 ynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelekivlvhylev 117 y+ +v ++DG++w+kkkd tv+Edhe+LK g+++vl+cyYah+een++fqrr+y +Lee+ ++i+lvhyle ONIVA10G07200.4 831 YKPMVVS--QNDGHNWRKKKDEMTVKEDHERLKSGSIDVLECYYAHGEENENFQRRMYRMLEEDVKHIILVHYLEI 904 5555666..89**************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1836 aa Download sequence
MEAPPLAAPI CASQGAMGSL LGKMEELLVA PDGSRLPKGV KDRMLLLGGD LGVVAAYLAD 60 LSELEDPPPT AKRWMREVRE LSYDIEDYID EFCAAPRPGR RANTTARFVC RIGRVKVARL 120 PKRLKRHQQM GKMVSQFRIY VEEAIERHGR YGLDCCDHRR RYVSFGPMLP SRPYGEEDAQ 180 LVIDGRVSEF IERLANDEDQ KLKVVSVVGF SGIGKTTLAK LFYNRIGGQF DCRAFVRVSR 240 KPDMKRIFRE MFYQVQRKQP PDDYKELMLI DSIREYLQDK RTNSSIEGTR QVLNLSYNNL 300 PHYLKTCLLY LNMYPEGYKI CKDDVVEKWV AEGFIDQIEG RDLKKVAGSY FDELIDRRFL 360 QPSRLNYNNE VSTCTIHDEV RDLIAYKSLE ESFVLVLDCY RKDVELSDKV RRLSVHFGDT 420 KYAKIPTNIR TSEVRSLTFF GLCKCMPSLT EFKLLRVLNL QLSGHVGDEL LDLSGISELF 480 QLRYLKIACN IRTELPSQMR GLKYLETLQM DTTLTAVPWD IIYLPCLLHL HLPFDTNMMD 540 LIGRMTHPST LLSLEPSSSN SLPSRGIISN LNNLRDIHLT FCTPPSKYIE RNMEVLGSLL 600 GRLGALEVNI SWEGLAPPPL LQKFEWLLDN CIFSRVPRWI EKLGNLRILK IAVRELPKNS 660 VDILKGLSAL TALSLSMHAI PVERIIFDNV GFSILKYFKF NCSSVLWLKF EAGAMPNLRK 720 LKLGFNVLRE DLHGTTPVSI GYLPSVKEIS VKIHGVGSDA ESVLTYTVSN HPSNPRINEK 780 LVDWTTYCEE GRHMVIKEKD HGFQEEQNEQ EYLDKYKQAD IRYQADTGGC YKPMVVSQND 840 GHNWRKKKDE MTVKEDHERL KSGSIDVLEC YYAHGEENEN FQRRMYRMLE EDVKHIILVH 900 YLEIKFSSAT GDSSATENTF QQNDGSLAAA IGYPILKTAS DILKDSFKEA DSFTRWMGKE 960 LAEVDYSQIQ SSCIEEADST IEASSREPLD QFNVAPMDLQ DHLFSIVSIL PRWTYAGSMT 1020 KLLVLSYIPN KSRRDSGGHA CLEKLKFQRR FQQMGLSNVI LPHINLAESL SMLPVPTACS 1080 GVREFEFRPT DSQYMDAPRP LGGTNKVYFR MRLDNLLSLG PDEYRAAITN QSSTKMIDLS 1140 KKIISLLANN DEWSKVLKLV DDNELFTDNR QDQFAVHLIK RKLHIWLLHK VRAGGKELSV 1200 LDDEGLGVIH LAAALGFDWA IRATVAAGVN INFRDVHGWT ALHWAAFCGR KRTVVALIAL 1260 GAAPGALTDP HPNYPVESTP ADLASANGHR GISGFLAESS LTSHLQSLNL KETNMSEISG 1320 LTGIGDITAR CASQPAIGDS LGAVLNAARM YQIFSVQSFQ RKQALQYEGL LSMKSSKPGQ 1380 LDPLHVAASR IQNKYRGWKG RKEFLCIRQR IVKIQAHVRG HQVRKHYQKM IWPVGIWEKI 1440 ILSGRPRPTG LRGFRPTEGT AKSSSHGTSS KGITDRPTGD DYDFLLEGRK QTEERPQKAL 1500 ARMKHMAQYP EARDHYRGMM TAVPEMQDSQ IIKNEDLEEL RELGSGTFGT VYHGKWKGSD 1560 VAIKRIKKSC FTGQSSELER LANEFWREAE ILSKLHHPNV VAFYGVVKDG PGGTLATVTE 1620 FMVNGSLRHV LQRKDKYLDR RKRLIIAMDA AFGLEYLHSK NIVHFDLKCD NLLVNLKDQS 1680 RPICKVGDFG LSKIKRNTLV SGGVRGTLPW MAPELLNGSS NKVSEKVDVF SFGIVMWEIL 1740 TGEEPYANMH YGAIIGGIVN NTLRPPVPVS CDPEWRRLME QCWAPDPSQR PAFTEIAGRL 1800 RAISPNMITP QRRPDLGLEE GPTWFVALGK KMRKRD

Sequence ? help Back to Top

Protein Sequence Length: 1836 aa Download sequence

MEAPPLAAPI CASQGAMGSL LGKMEELLVA PDGSRLPKGV KDRMLLLGGD LGVVAAYLAD  60
LSELEDPPPT AKRWMREVRE LSYDIEDYID EFCAAPRPGR RANTTARFVC RIGRVKVARL  120
PKRLKRHQQM GKMVSQFRIY VEEAIERHGR YGLDCCDHRR RYVSFGPMLP SRPYGEEDAQ  180
LVIDGRVSEF IERLANDEDQ KLKVVSVVGF SGIGKTTLAK LFYNRIGGQF DCRAFVRVSR  240
KPDMKRIFRE MFYQVQRKQP PDDYKELMLI DSIREYLQDK RTNSSIEGTR QVLNLSYNNL  300
PHYLKTCLLY LNMYPEGYKI CKDDVVEKWV AEGFIDQIEG RDLKKVAGSY FDELIDRRFL  360
QPSRLNYNNE VSTCTIHDEV RDLIAYKSLE ESFVLVLDCY RKDVELSDKV RRLSVHFGDT  420
KYAKIPTNIR TSEVRSLTFF GLCKCMPSLT EFKLLRVLNL QLSGHVGDEL LDLSGISELF  480
QLRYLKIACN IRTELPSQMR GLKYLETLQM DTTLTAVPWD IIYLPCLLHL HLPFDTNMMD  540
LIGRMTHPST LLSLEPSSSN SLPSRGIISN LNNLRDIHLT FCTPPSKYIE RNMEVLGSLL  600
GRLGALEVNI SWEGLAPPPL LQKFEWLLDN CIFSRVPRWI EKLGNLRILK IAVRELPKNS  660
VDILKGLSAL TALSLSMHAI PVERIIFDNV GFSILKYFKF NCSSVLWLKF EAGAMPNLRK  720
LKLGFNVLRE DLHGTTPVSI GYLPSVKEIS VKIHGVGSDA ESVLTYTVSN HPSNPRINEK  780
LVDWTTYCEE GRHMVIKEKD HGFQEEQNEQ EYLDKYKQAD IRYQADTGGC YKPMVVSQND  840
GHNWRKKKDE MTVKEDHERL KSGSIDVLEC YYAHGEENEN FQRRMYRMLE EDVKHIILVH  900
YLEIKFSSAT GDSSATENTF QQNDGSLAAA IGYPILKTAS DILKDSFKEA DSFTRWMGKE  960
LAEVDYSQIQ SSCIEEADST IEASSREPLD QFNVAPMDLQ DHLFSIVSIL PRWTYAGSMT  1020
KLLVLSYIPN KSRRDSGGHA CLEKLKFQRR FQQMGLSNVI LPHINLAESL SMLPVPTACS  1080
GVREFEFRPT DSQYMDAPRP LGGTNKVYFR MRLDNLLSLG PDEYRAAITN QSSTKMIDLS  1140
KKIISLLANN DEWSKVLKLV DDNELFTDNR QDQFAVHLIK RKLHIWLLHK VRAGGKELSV  1200
LDDEGLGVIH LAAALGFDWA IRATVAAGVN INFRDVHGWT ALHWAAFCGR KRTVVALIAL  1260
GAAPGALTDP HPNYPVESTP ADLASANGHR GISGFLAESS LTSHLQSLNL KETNMSEISG  1320
LTGIGDITAR CASQPAIGDS LGAVLNAARM YQIFSVQSFQ RKQALQYEGL LSMKSSKPGQ  1380
LDPLHVAASR IQNKYRGWKG RKEFLCIRQR IVKIQAHVRG HQVRKHYQKM IWPVGIWEKI  1440
ILSGRPRPTG LRGFRPTEGT AKSSSHGTSS KGITDRPTGD DYDFLLEGRK QTEERPQKAL  1500
ARMKHMAQYP EARDHYRGMM TAVPEMQDSQ IIKNEDLEEL RELGSGTFGT VYHGKWKGSD  1560
VAIKRIKKSC FTGQSSELER LANEFWREAE ILSKLHHPNV VAFYGVVKDG PGGTLATVTE  1620
FMVNGSLRHV LQRKDKYLDR RKRLIIAMDA AFGLEYLHSK NIVHFDLKCD NLLVNLKDQS  1680
RPICKVGDFG LSKIKRNTLV SGGVRGTLPW MAPELLNGSS NKVSEKVDVF SFGIVMWEIL  1740
TGEEPYANMH YGAIIGGIVN NTLRPPVPVS CDPEWRRLME QCWAPDPSQR PAFTEIAGRL  1800
RAISPNMITP QRRPDLGLEE GPTWFVALGK KMRKRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	1e-117	CAMTA family protein

Link Out ? help Back to Top
Ensembl	ONIVA10G07200.4