PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA10G07150.3
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family GRAS
Protein Properties Length: 559aa    MW: 61863.8 Da    PI: 6.1707
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA10G07150.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS431.37.4e-1321895581373
             GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                      l++++++c +av+++d +l++ l+++l +++s +gdp+qRl ay++e+L arl++s+s++yk+l+++  +   sse +++++l++e++P++kf+
  ONIVA10G07150.3 189 LKQVIIACGKAVAENDVRLTELLISELGQMVSVSGDPLQRLGAYMLEGLVARLSSSGSKIYKSLKCKVPT---SSELMSYMHLLYEICPFFKFG 279
                      57899****************************************************************9...99******************* PP

             GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrl 186
                      ++ aN aI ea++ge+ vHiiDf+i qG QW++L+qaLa+Rp+gpp lRiTg+++++s   +   l  +g rL k+A+++g+pfefn+ v  + 
  ONIVA10G07150.3 280 YMSANGAIAEAIKGENFVHIIDFQIAQGSQWMTLIQALAARPGGPPFLRITGIDDSNSAyaRGGGLDVVGMRLYKVAQSFGLPFEFNA-VPAAS 372
                      *******************************************************988899999************************.79999 PP

             GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklprese 280
                      +++ le+L+++ gE+++Vn+++qlh+++desvs+e++rd++L++vkslsP++v++veqe+++n+ +F+ r le+l+yy+a+f+s+++ lpr+++
  ONIVA10G07150.3 373 HEVYLEHLDIRVGEVIVVNFAYQLHHTPDESVSTENHRDRILRMVKSLSPRLVTLVEQESNTNTRPFFPRYLETLDYYTAMFESIDVALPRDDK 466
                      ********************************************************************************************** PP

             GRAS 281 erikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                       r++ E+++++r+ivn++acegaer+erhe ++kW++rl++aGF+p+pls+ +++++k+ll++++s  yr+ee++g l+lgWk+r Lv+ SaW
  ONIVA10G07150.3 467 RRMSAEQHCVARDIVNLIACEGAERVERHEVFGKWKARLTMAGFRPYPLSSVVNSTIKTLLHTYNSF-YRLEERDGVLYLGWKNRVLVVSSAW 558
                      *****************************************************************65.************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 559 aa     Download sequence    
MDGRINSLLS TIPQDFTSMS ARASNHAYIC SDDSQMPYYN NSVPSGGNGR FYITQNHQDA  60
HYASSDDGSQ KIGSSPQAFE APYCTLESSS ANGAHPAHSS ASSHSISPIS GSPLSHHDSH  120
SDHTYNSPPS ASCVTEITDL QIKLRELENA ILGPELDIAY DSPESALQPN IMATPENWRQ  180
LLGINTGDLK QVIIACGKAV AENDVRLTEL LISELGQMVS VSGDPLQRLG AYMLEGLVAR  240
LSSSGSKIYK SLKCKVPTSS ELMSYMHLLY EICPFFKFGY MSANGAIAEA IKGENFVHII  300
DFQIAQGSQW MTLIQALAAR PGGPPFLRIT GIDDSNSAYA RGGGLDVVGM RLYKVAQSFG  360
LPFEFNAVPA ASHEVYLEHL DIRVGEVIVV NFAYQLHHTP DESVSTENHR DRILRMVKSL  420
SPRLVTLVEQ ESNTNTRPFF PRYLETLDYY TAMFESIDVA LPRDDKRRMS AEQHCVARDI  480
VNLIACEGAE RVERHEVFGK WKARLTMAGF RPYPLSSVVN STIKTLLHTY NSFYRLEERD  540
GVLYLGWKNR VLVVSSAWC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein