PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA10G04710.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family GRAS
Protein Properties Length: 820aa    MW: 90716.2 Da    PI: 5.9598
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA10G04710.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS386.92.2e-1184448132374
             GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                      ++lL++cA+ v+++d + a++lL++++++a  +gd  qRla++f+++L+arla+++s++yk  + ++ +    +++l+a++l+  ++P+ k+sh
  ONIVA10G04710.1 444 ETLLIHCAQSVATDDRRSATELLKQIRQHAHANGDGDQRLAHCFANGLEARLAGTGSQIYKNYTITRLP---CTDVLKAYQLYLAACPFKKISH 534
                      789************************************************************999999...9********************* PP

             GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrle 187
                        aNq+Il+ave++++vHi+D++i +G+QWp+L+q L++Rp+gpp+lRiTg++ p++g   +e++eetg+ L+++A++++vpfef++ +a+r+e
  ONIVA10G04710.1 535 YFANQTILNAVEKAKKVHIVDYGIYYGFQWPCLIQRLSNRPGGPPKLRITGIDTPQPGfrPAERTEETGRYLSDYAQTFNVPFEFQA-IASRFE 627
                      ***************************************************************************************.7***** PP

             GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpresee 281
                      ++++e+L+++++E+l+Vn++++ ++l+desv  es+r+  Lk++++++P+v+++   + ++n++ F++rf eal +ysa+fd+le+++p+++e+
  ONIVA10G04710.1 628 AVRMEDLHIEEDEVLIVNCMFKFKNLMDESVVAESPRNMALKTIRKMNPHVFIHGVVNGSYNAPFFVTRFREALFHYSAIFDMLETNIPKDNEQ 721
                      ********************************************************************************************** PP

             GRAS 282 rikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      r  +E +l++re+ nv++ceg er er et+++W+ r +++GFk++pl+++++k a+  +r +++d + ++e++ +l++gWk+r L+++S W+
  ONIVA10G04710.1 722 RLLIESALFSREAINVISCEGLERMERPETYKQWQVRNQRVGFKQLPLNQDMMKRAREKVRCYHKD-FIIDEDNRWLLQGWKGRILFALSTWK 813
                      ****************************************************************77.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 820 aa     Download sequence    
MVMDAGVHDV CTMLPGSKRD AHLPLPIYPQ IAAANGFATA EEFDPLLFLS PDAVCGGGGG  60
DYLNIVSAQP ISAASTNGAS PPRDVSVSAS AASSAAAQHD DSEAFSDIVL GYINRMLMAE  120
DIDEKFEHYP VNADDLLAAE KPFLEILADQ SPYSGGSSVE SPDGSSAANS CNSLSPCNCS  180
SSSDGLGAVP QTPVLEFPTT AFSQTPQLYG DLIPTGGMVE SGGAWPYDPT EFYQLQTKPV  240
RENLLSQSSS FASSIGSSVT FSEGFESLLS PAGVLPDVSL NDFVVQNQQA LQFRRGFQEA  300
SKFLPDESKL VIDVDKLYSG DEGSRFLGEV RQEKKLVKVK TETSDVESAG HRGKKHFYGD  360
DLDAEEGRCS KHSAQGIDTD HLVRDLMDKV LLCNGETCSK GVKELREALQ HDVAKHSGGG  420
HGKGSSHGKG RGKKQPKKEV VDLETLLIHC AQSVATDDRR SATELLKQIR QHAHANGDGD  480
QRLAHCFANG LEARLAGTGS QIYKNYTITR LPCTDVLKAY QLYLAACPFK KISHYFANQT  540
ILNAVEKAKK VHIVDYGIYY GFQWPCLIQR LSNRPGGPPK LRITGIDTPQ PGFRPAERTE  600
ETGRYLSDYA QTFNVPFEFQ AIASRFEAVR MEDLHIEEDE VLIVNCMFKF KNLMDESVVA  660
ESPRNMALKT IRKMNPHVFI HGVVNGSYNA PFFVTRFREA LFHYSAIFDM LETNIPKDNE  720
QRLLIESALF SREAINVISC EGLERMERPE TYKQWQVRNQ RVGFKQLPLN QDMMKRAREK  780
VRCYHKDFII DEDNRWLLQG WKGRILFALS TWKPDNRSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-176GRAS family protein