PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA10G03230.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family C2H2
Protein Properties Length: 345aa    MW: 36782.7 Da    PI: 5.8811
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA10G03230.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.20.00124463120
                     EEETTTTEEESSHHHHHHHH CS
          zf-C2H2  1 ykCpdCgksFsrksnLkrHi 20
                     + C  Cgk+F+++  +  H 
  ONIVA10G03230.1 44 FACRVCGKRFPSQQAMAGHE 63
                     78***********9988885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MSPMRPRSSS ASSTSPVAGK KEKTATKPAG GGARDPPKGR SSSFACRVCG KRFPSQQAMA  60
GHEDHCRRHE DHVREAAAAT AAAVVVVATA AASGGCSNRA TCGALLASYT CATQLLAAAA  120
VADWSQVAAG ILLSKEQLVV AVAVAIVVAD DGQGQAAEVF LLDLAAEELN LGPSMNNEAT  180
SIPKALPALS GQFIIDGATG LTDDLGRVEA KGLAYVEGLE EVEELSKWYI AQTHVRLVTI  240
EDPDIPEIAD VDTLYPMQSA PVTHLMGDIA EELYSDTTSL WEKLRDNIAR SLEEMMSALD  300
RMRQKCKRIM RGHSTGMHQK STVPQDTGLR TPYRNNRLDT TVYLF