PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA10G01080.4
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family BBR-BPC
Protein Properties Length: 332aa    MW: 36483.6 Da    PI: 10.0996
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA10G01080.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind382.85.4e-11713281300
        GAGA_bind   1 mdddgsre.rnkg.yyepaaslkenlglqlmssia.erdaki...........rernlalsekkaavaerd..................maflq 62 
                      mddd+s++ r +g ++e+    ++nlglqlmss++ +rd+k+           +++++  +++++++++rd                  +    
  ONIVA10G01080.4   1 MDDDASMSiR-WGgFFESP---ARNLGLQLMSSVPaDRDTKQllsgspflhhqHQQQHVPHHHHQPHHPRDcgangnanggamppppatE---- 86 
                      9*******66.777***99...88**********99***************99777777***********************99976431.... PP

        GAGA_bind  63 rdkalaernkalverdnkllalllvensla...salpvgvqvlsgtksidslqqlsepqledsave.lreeeklealpieeaaeeakekkkkkk 152
                          +  + +++++r++k+l++l+v ++++   +++pvg+++++gt++++++qq++epq ++++ + +++ee+++++ iee++++++e + +kk
  ONIVA10G01080.4  87 APPSMPMNFQHHHPREHKVLHNLTVGHGSShiaHHDPVGYGMIPGTHTLQMMQQQTEPQPQPPPPPqQPKEECISSPLIEENVPVIDEPPPPKK 180
                      333444444899***************9988999***************************99999899************************* PP

        GAGA_bind 153 rqrakkpkekkakkkkkksekskkkvkkesad.erskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLP 245
                      rq++++pk+++akk+kk s++++++ ++++a+ +r++ ++k+i++v+ng++lD s++P+PvCsCtGa++qCY+WG+GGWqSaCCtttiS+yPLP
  ONIVA10G01080.4 181 RQQGRQPKVPRAKKPKK-SAAPREDGAPPNAPaPRRRGPRKNIGMVINGIDLDLSRIPTPVCSCTGAPQQCYRWGAGGWQSACCTTTISTYPLP 273
                      *****************.88999*******999************************************************************* PP

        GAGA_bind 246 vstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvti 300
                      +stkrrgaRiagrKmS+gafkk+LekLa+eGy+l+np+DLk++WAkHGtnkfvti
  ONIVA10G01080.4 274 MSTKRRGARIAGRKMSHGAFKKVLEKLAGEGYNLNNPIDLKTFWAKHGTNKFVTI 328
                      ******************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MDDDASMSIR WGGFFESPAR NLGLQLMSSV PADRDTKQLL SGSPFLHHQH QQQHVPHHHH  60
QPHHPRDCGA NGNANGGAMP PPPATEAPPS MPMNFQHHHP REHKVLHNLT VGHGSSHIAH  120
HDPVGYGMIP GTHTLQMMQQ QTEPQPQPPP PPQQPKEECI SSPLIEENVP VIDEPPPPKK  180
RQQGRQPKVP RAKKPKKSAA PREDGAPPNA PAPRRRGPRK NIGMVINGID LDLSRIPTPV  240
CSCTGAPQQC YRWGAGGWQS ACCTTTISTY PLPMSTKRRG ARIAGRKMSH GAFKKVLEKL  300
AGEGYNLNNP IDLKTFWAKH GTNKFVTISC LV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14685.12e-59BBR-BPC family protein