PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA10G01080.3
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family BBR-BPC
Protein Properties Length: 454aa    MW: 49416.2 Da    PI: 8.6934
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA10G01080.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind406.14.2e-12413421301
        GAGA_bind   1 mdddgsre.rnkg.yyepaaslkenlglqlmssia.erdaki...........rernlalsekkaavaerd....................... 57 
                      mddd+s++ r +g ++e+    ++nlglqlmss++ +rd+k+           +++++  +++++++++rd                       
  ONIVA10G01080.3   1 MDDDASMSiR-WGgFFESP---ARNLGLQLMSSVPaDRDTKQllsgspflhhqHQQQHVPHHHHQPHHPRDcgangnanggamppppateapps 90 
                      9*******66.777***99...88**********99***************99777777*********************************** PP

        GAGA_bind  58 ..maflqrdkalae..rnkalverdnkllalllvensla...salpvgvqvlsgtksidslqqlsepqledsave.lreeeklealpieeaaee 143
                        m+f+++d++++   +++++++r++k+l++l+v ++++   +++pvg+++++gt++++++qq++epq ++++ + +++ee+++++ iee++++
  ONIVA10G01080.3  91 mpMNFVRSDMWMHPqqQQQHHHPREHKVLHNLTVGHGSShiaHHDPVGYGMIPGTHTLQMMQQQTEPQPQPPPPPqQPKEECISSPLIEENVPV 184
                      ************9754778999**************9988999***************************99999899**************** PP

        GAGA_bind 144 akekkkkkkrqrakkpkekkakkkkkksekskkkvkkesad.erskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCt 236
                      ++e + +kkrq++++pk+++akk+kk s++++++ ++++a+ +r++ ++k+i++v+ng++lD s++P+PvCsCtGa++qCY+WG+GGWqSaCCt
  ONIVA10G01080.3 185 IDEPPPPKKRQQGRQPKVPRAKKPKK-SAAPREDGAPPNAPaPRRRGPRKNIGMVINGIDLDLSRIPTPVCSCTGAPQQCYRWGAGGWQSACCT 277
                      **************************.88999*******999**************************************************** PP

        GAGA_bind 237 ttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                      ttiS+yPLP+stkrrgaRiagrKmS+gafkk+LekLa+eGy+l+np+DLk++WAkHGtnkfvtir
  ONIVA10G01080.3 278 TTISTYPLPMSTKRRGARIAGRKMSHGAFKKVLEKLAGEGYNLNNPIDLKTFWAKHGTNKFVTIR 342
                      ****************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 454 aa     Download sequence    
MDDDASMSIR WGGFFESPAR NLGLQLMSSV PADRDTKQLL SGSPFLHHQH QQQHVPHHHH  60
QPHHPRDCGA NGNANGGAMP PPPATEAPPS MPMNFVRSDM WMHPQQQQQH HHPREHKVLH  120
NLTVGHGSSH IAHHDPVGYG MIPGTHTLQM MQQQTEPQPQ PPPPPQQPKE ECISSPLIEE  180
NVPVIDEPPP PKKRQQGRQP KVPRAKKPKK SAAPREDGAP PNAPAPRRRG PRKNIGMVIN  240
GIDLDLSRIP TPVCSCTGAP QQCYRWGAGG WQSACCTTTI STYPLPMSTK RRGARIAGRK  300
MSHGAFKKVL EKLAGEGYNL NNPIDLKTFW AKHGTNKFVT IRAHSSWALL PSLSDDGLYD  360
QEILDVAPLQ AQPSSPEVTP AVLQIPMAPE ILDVAPLQAQ PSSPEVTPAV LQIPMAPDIS  420
SLSVSGADLH PPAEQRPAPP PPPSVPPVSR PGST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14685.19e-60BBR-BPC family protein